Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPL23AP49-201ENST00000492925 468 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 RPL39P5-202ENST00000512505 151 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 RNA5SP112-201ENST00000515937 99 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 SCARNA15.1-201ENST00000516384 125 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 RNU6-1016P-201ENST00000516689 94 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AC026241.1-201ENST00000517873 2142 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN3P51790 AC079598.5-201ENST00000547460 117 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AC026371.1-201ENST00000551867 419 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 RPS15AP11-201ENST00000594193 385 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AC009314.1-201ENST00000603871 304 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN3P51790 AC064836.2-201ENST00000609491 462 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN3P51790 KPNA2P1-201ENST00000458289 1591 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CLCN3P51790 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CLCN3P51790 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLCN3P51790 RNU6-486P-201ENST00000363116 107 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 SNORD73A-201ENST00000386062 65 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLCN3P51790 MTCO2P27-201ENST00000420740 428 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 MTCO2P12-201ENST00000427426 682 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 RPS15AP7-201ENST00000439294 405 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 Z96811.1-201ENST00000445880 108 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 SNORD5.1-201ENST00000458800 75 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 RNU7-187P-201ENST00000458985 68 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN3P51790 AC096745.1-201ENST00000509945 370 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AC026436.1-201ENST00000510537 270 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCN3P51790 ELOCP31-201ENST00000540463 467 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN3P51790 AC090897.2-201ENST00000581715 130 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 MIR4765-201ENST00000585007 77 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 SNRPGP17-201ENST00000603780 214 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AC018462.2-201ENST00000605375 395 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AL080274.1-201ENST00000605565 220 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AP000654.2-201ENST00000605633 586 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AL161423.1-201ENST00000613700 262 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AC084781.2-201ENST00000615568 161 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN3P51790 MIR1291-201ENST00000627649 87 ntBASIC2.66□□□□□ -1.98
CLCN3P51790 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCN3P51790 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCN3P51790 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CLCN3P51790 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CLCN3P51790 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CLCN3P51790 RNU6-527P-201ENST00000363425 104 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 Y_RNA.187-201ENST00000363918 113 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RNU6-474P-201ENST00000384243 107 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RNU6-601P-201ENST00000384540 107 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RNU6-310P-201ENST00000384655 107 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 Z98742.3-201ENST00000418637 326 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AC104332.2-201ENST00000429959 156 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RPS15AP10-201ENST00000432472 382 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AC007969.2-201ENST00000441891 191 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 MTCO3P10-201ENST00000455912 772 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCN3P51790 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.65□□□□□ -1.99
CLCN3P51790 RNU1-41P-201ENST00000516161 162 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RNU1-48P-201ENST00000516400 162 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 SNORA31.18-201ENST00000517043 134 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 COX6CP5-201ENST00000527162 228 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AP002770.2-201ENST00000543613 532 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCN3P51790 AL442663.2-201ENST00000554385 511 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 CPDP1-201ENST00000579660 283 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AL356157.2-201ENST00000605122 111 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AL359198.2-201ENST00000611836 194 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AC024581.2-201ENST00000619986 252 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 AC134503.1-201ENST00000633048 54 ntBASIC2.65□□□□□ -1.99
CLCN3P51790 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCN3P51790 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CLCN3P51790 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CLCN3P51790 ZNF658B-202ENST00000615961 3375 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCN3P51790 SNORD114-19-201ENST00000363072 75 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 Y_RNA.132-201ENST00000363421 102 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 RNU6-336P-201ENST00000364891 107 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 SNORA70B-201ENST00000384210 135 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 MIR627-201ENST00000384979 97 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 Y_RNA.646-201ENST00000410980 101 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 RN7SKP284-201ENST00000411002 343 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 AC097463.2-201ENST00000421074 142 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 AL031274.1-201ENST00000450334 232 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 RNU6-1037P-201ENST00000459571 107 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 RPL36AP48-201ENST00000485521 314 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 RNA5SP281-201ENST00000516504 135 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 RNU6-56P-201ENST00000516986 93 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCN3P51790 AL669831.3-213ENST00000636676 183 ntBASIC2.64□□□□□ -1.99
CLCN3P51790 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CLCN3P51790 AC002543.1-201ENST00000299783 1954 ntBASIC2.63□□□□□ -1.99
CLCN3P51790 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCN3P51790 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms