Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MT-TD-201ENST00000387419 68 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
HNF4AP41235 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.37□□□□□ -2.03
HNF4AP41235 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 MTND4P17-201ENST00000470444 350 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.37□□□□□ -2.03
HNF4AP41235 AC092436.3-201ENST00000511788 257 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 RNU2-53P-201ENST00000516257 147 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 RNA5SP454-201ENST00000517231 127 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AC087854.1-201ENST00000519706 414 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 COPS8P3-201ENST00000526024 482 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AP005597.4-201ENST00000526762 229 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.37□□□□□ -2.03
HNF4AP41235 AC093027.1-201ENST00000546698 429 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AC025423.5-201ENST00000550230 219 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
HNF4AP41235 MIR4795-201ENST00000584182 89 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AL121917.1-203ENST00000605534 577 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AL022345.1-201ENST00000607292 135 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 AP006437.1-201ENST00000641440 3685 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HNF4AP41235 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
HNF4AP41235 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HNF4AP41235 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-37P-201ENST00000362692 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-11P-201ENST00000364234 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 U8.8-201ENST00000365399 135 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 SNORA25B-201ENST00000365507 128 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.36□□□□□ -2.03
HNF4AP41235 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-25P-201ENST00000383873 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-1-201ENST00000383898 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-48P-201ENST00000384161 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-36P-201ENST00000384172 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-4P-201ENST00000384205 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-5P-201ENST00000384238 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-3P-201ENST00000384314 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-16P-201ENST00000384385 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 SNORD116-20-201ENST00000384529 92 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-15P-201ENST00000384534 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-2-201ENST00000384627 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-29P-201ENST00000384637 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-9-201ENST00000384776 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-33P-201ENST00000384793 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 MIR548K-201ENST00000408406 116 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.36□□□□□ -2.03
HNF4AP41235 RNU4-14P-201ENST00000410858 122 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.36□□□□□ -2.03
HNF4AP41235 AL590632.1-201ENST00000424289 371 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AC008267.5-201ENST00000424928 265 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.36□□□□□ -2.03
HNF4AP41235 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.36□□□□□ -2.03
HNF4AP41235 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.36□□□□□ -2.03
HNF4AP41235 RNU7-138P-201ENST00000459479 64 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AC055731.1-201ENST00000474387 401 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AC107032.1-201ENST00000485945 480 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.36□□□□□ -2.03
HNF4AP41235 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.36□□□□□ -2.03
HNF4AP41235 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 Y_RNA.687-201ENST00000516558 91 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-586P-201ENST00000517265 104 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU2-19P-201ENST00000517288 84 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AP005639.2-201ENST00000527592 928 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.36□□□□□ -2.03
HNF4AP41235 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.36□□□□□ -2.03
HNF4AP41235 POLR3GP2-201ENST00000588366 668 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 RNU6-6P-201ENST00000606623 107 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 MIR6852-201ENST00000621699 66 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 MTND4P29-201ENST00000503122 1372 ntBASIC2.36□□□□□ -2.03
HNF4AP41235 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HNF4AP41235 Y_RNA.58-201ENST00000362807 102 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 Y_RNA.154-201ENST00000363624 102 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 RNY3P1-201ENST00000365085 102 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 RNY3-201ENST00000365484 102 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 Y_RNA.490-201ENST00000384413 102 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 MIR548F5-201ENST00000408421 86 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.35□□□□□ -2.03
HNF4AP41235 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AIMP1P2-201ENST00000425294 312 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 RPS3AP52-201ENST00000435639 297 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.35□□□□□ -2.03
HNF4AP41235 AL359672.1-201ENST00000442302 409 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.35□□□□□ -2.03
HNF4AP41235 AC069113.1-201ENST00000517763 267 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.35□□□□□ -2.03
HNF4AP41235 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 IMMP1LP2-201ENST00000552954 492 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AC093249.1-201ENST00000567049 203 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AL355375.2-201ENST00000574825 175 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 AC064836.2-201ENST00000609491 462 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.35□□□□□ -2.03
HNF4AP41235 Z69720.2-201ENST00000624755 279 ntBASIC2.35□□□□□ -2.03
HNF4AP41235 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms