Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 SNORD56.1-201ENST00000362913 68 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 Y_RNA.85-201ENST00000363014 111 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 MIR10A-201ENST00000385043 110 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 Y_RNA.578-201ENST00000390903 88 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 RPS3AP36-201ENST00000398190 775 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 ARL5AP1-201ENST00000418991 388 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 USP9YP21-201ENST00000420603 432 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 HMGN1P33-201ENST00000432945 451 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 MTCO1P27-201ENST00000448269 226 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXA6P31267 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXA6P31267 RNU6-1028P-201ENST00000517164 93 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 OR8K2P-201ENST00000524645 927 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 AC023050.2-201ENST00000544968 387 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 AP002802.2-201ENST00000605877 235 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
HOXA6P31267 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.63□□□□□ -2.31
HOXA6P31267 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.62□□□□□ -2.31
HOXA6P31267 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HOXA6P31267 SNORA63D-201ENST00000364359 132 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 MTND4P3-201ENST00000417829 541 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 AC063976.4-201ENST00000421971 163 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 GTF2IP13-201ENST00000438487 386 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.62□□□□□ -2.31
HOXA6P31267 RNA5SP216-201ENST00000516111 123 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.62□□□□□ -2.31
HOXA6P31267 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.62□□□□□ -2.31
HOXA6P31267 MIR4709-201ENST00000577272 72 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 AC124016.2-201ENST00000610058 665 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 AC091925.1-201ENST00000623204 462 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 AC092104.1-201ENST00000497346 1441 ntBASIC0.62□□□□□ -2.31
HOXA6P31267 MIR194-1-201ENST00000384892 85 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 SNORA40.2-201ENST00000390847 128 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 RPS3AP1-201ENST00000413190 320 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AC099677.2-201ENST00000436385 175 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.61□□□□□ -2.31
HOXA6P31267 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.61□□□□□ -2.31
HOXA6P31267 AC113347.3-201ENST00000509113 148 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.61□□□□□ -2.31
HOXA6P31267 AP003355.1-201ENST00000518956 587 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
HOXA6P31267 AC087894.1-201ENST00000538359 518 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 BNIP3P16-201ENST00000589779 534 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 BNIP3P26-201ENST00000600827 554 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AC005776.1-201ENST00000603164 290 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 MIR3976-201ENST00000606807 139 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AC106800.4-201ENST00000614905 153 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AC024940.5-201ENST00000622889 474 ntBASIC0.61□□□□□ -2.31
HOXA6P31267 AL159152.1-201ENST00000635019 2587 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
HOXA6P31267 RNU1-96P-201ENST00000364163 162 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 RNU6-621P-201ENST00000364752 109 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 RNU6-224P-201ENST00000384055 107 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 SNORD12-201ENST00000391002 90 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 RN7SKP266-201ENST00000410232 287 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 RNA5SP127-201ENST00000411051 133 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 AL358176.2-201ENST00000425769 204 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 AL008629.1-201ENST00000438615 184 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 SNRPEP8-201ENST00000442866 260 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 NDUFB1P2-201ENST00000449477 176 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.6□□□□□ -2.31
HOXA6P31267 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.6□□□□□ -2.31
HOXA6P31267 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.6□□□□□ -2.31
HOXA6P31267 RPS27P22-201ENST00000478056 241 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HOXA6P31267 AL138889.2-201ENST00000603883 242 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 AC130324.3-201ENST00000614165 542 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 AL354696.1-201ENST00000614652 497 ntBASIC0.6□□□□□ -2.31
HOXA6P31267 Y_RNA.68-201ENST00000362881 102 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 Y_RNA.311-201ENST00000365068 96 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 MTCO1P21-201ENST00000416634 589 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 ELOCP9-201ENST00000418624 239 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.59□□□□□ -2.31
HOXA6P31267 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.59□□□□□ -2.31
HOXA6P31267 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.59□□□□□ -2.31
HOXA6P31267 AK3P2-201ENST00000507976 429 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 LRRC34P2-201ENST00000514850 553 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 AC091163.3-201ENST00000518269 1144 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.59□□□□□ -2.31
HOXA6P31267 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.59□□□□□ -2.31
HOXA6P31267 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.59□□□□□ -2.31
HOXA6P31267 AC009229.3-201ENST00000608056 282 ntBASIC0.59□□□□□ -2.31
HOXA6P31267 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.59□□□□□ -2.31
HOXA6P31267 RNU6-1123P-201ENST00000362347 106 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 RNU6-862P-201ENST00000362804 105 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 ELOCP17-201ENST00000414751 326 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 USP9YP11-201ENST00000427537 717 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
HOXA6P31267 AL122001.1-201ENST00000457027 370 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 MTCO3P27-201ENST00000514397 196 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 SNORA43.2-201ENST00000516652 128 ntBASIC0.58□□□□□ -2.32
HOXA6P31267 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.58□□□□□ -2.32
HOXA6P31267 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.58□□□□□ -2.32
HOXA6P31267 MIR15A-201ENST00000607334 83 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms