Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 HMGN1P11-201ENST00000508668 303 ntBASIC3.03□□□□□ -1.92
LMO1P25800 RNU2-27P-201ENST00000516185 142 ntBASIC3.03□□□□□ -1.92
LMO1P25800 RNU6-168P-201ENST00000516189 101 ntBASIC3.03□□□□□ -1.92
LMO1P25800 SNORA25.12-201ENST00000516202 82 ntBASIC3.03□□□□□ -1.92
LMO1P25800 RN7SKP289-201ENST00000517244 295 ntBASIC3.03□□□□□ -1.92
LMO1P25800 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO1P25800 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.03□□□□□ -1.92
LMO1P25800 SRGNP1-201ENST00000603392 451 ntBASIC3.03□□□□□ -1.92
LMO1P25800 AC099506.2-201ENST00000623074 221 ntBASIC3.03□□□□□ -1.92
LMO1P25800 AC012442.3-202ENST00000636742 206 ntBASIC3.03□□□□□ -1.92
LMO1P25800 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO1P25800 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO1P25800 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LMO1P25800 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO1P25800 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO1P25800 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
LMO1P25800 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO1P25800 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
LMO1P25800 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO1P25800 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO1P25800 MIR30E-201ENST00000362104 92 ntBASIC3.02□□□□□ -1.93
LMO1P25800 Y_RNA.23-201ENST00000362496 106 ntBASIC3.02□□□□□ -1.93
LMO1P25800 Y_RNA.136-201ENST00000363444 102 ntBASIC3.02□□□□□ -1.93
LMO1P25800 SNORD78.2-201ENST00000391076 69 ntBASIC3.02□□□□□ -1.93
LMO1P25800 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.02□□□□□ -1.93
LMO1P25800 AL353621.1-201ENST00000418219 243 ntBASIC3.02□□□□□ -1.93
LMO1P25800 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.02□□□□□ -1.93
LMO1P25800 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.02□□□□□ -1.93
LMO1P25800 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
LMO1P25800 RPS4XP22-201ENST00000480755 780 ntBASIC3.02□□□□□ -1.93
LMO1P25800 RPS4XP13-201ENST00000483219 789 ntBASIC3.02□□□□□ -1.93
LMO1P25800 PHBP14-201ENST00000512887 367 ntBASIC3.02□□□□□ -1.93
LMO1P25800 RNA5SP471-201ENST00000516971 106 ntBASIC3.02□□□□□ -1.93
LMO1P25800 AL590705.4-201ENST00000532209 134 ntBASIC3.02□□□□□ -1.93
LMO1P25800 TRAV28-201ENST00000557548 323 ntBASIC3.02□□□□□ -1.93
LMO1P25800 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.02□□□□□ -1.93
LMO1P25800 AC104581.2-201ENST00000572227 430 ntBASIC3.02□□□□□ -1.93
LMO1P25800 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LMO1P25800 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
LMO1P25800 AC005828.6-201ENST00000606610 232 ntBASIC3.02□□□□□ -1.93
LMO1P25800 MIR7153-201ENST00000637758 57 ntBASIC3.02□□□□□ -1.93
LMO1P25800 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
LMO1P25800 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
LMO1P25800 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.02□□□□□ -1.93
LMO1P25800 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
LMO1P25800 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO1P25800 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LMO1P25800 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
LMO1P25800 AL359693.1-201ENST00000614959 2407 ntBASIC3.01□□□□□ -1.93
LMO1P25800 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO1P25800 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
LMO1P25800 MFSD8-233ENST00000641482 4860 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RPL9P7-201ENST00000330965 580 ntBASIC3.01□□□□□ -1.93
LMO1P25800 Y_RNA.75-201ENST00000362927 97 ntBASIC3.01□□□□□ -1.93
LMO1P25800 Y_RNA.245-201ENST00000364493 95 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU6-312P-201ENST00000364629 107 ntBASIC3.01□□□□□ -1.93
LMO1P25800 Y_RNA.324-201ENST00000365165 102 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU6-805P-201ENST00000365643 106 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU6-926P-201ENST00000384075 107 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU6-1197P-201ENST00000391183 107 ntBASIC3.01□□□□□ -1.93
LMO1P25800 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU2-2P-201ENST00000410396 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU6-1064P-201ENST00000410626 104 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO1P25800 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO1P25800 AL513043.1-201ENST00000439124 535 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.01□□□□□ -1.93
LMO1P25800 FABP5P15-201ENST00000453566 214 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC133134.1-201ENST00000466800 359 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RN7SL594P-201ENST00000470590 287 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC022493.1-201ENST00000492984 337 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RPL30P5-201ENST00000494923 336 ntBASIC3.01□□□□□ -1.93
LMO1P25800 UBE2CP3-201ENST00000502715 450 ntBASIC3.01□□□□□ -1.93
LMO1P25800 ANXA2P1-201ENST00000505539 926 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO1P25800 MIR1273C-201ENST00000578669 77 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
LMO1P25800 MIR5692A1-201ENST00000580523 69 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC010928.2-201ENST00000588017 287 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC009314.1-201ENST00000603871 304 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AL161756.2-201ENST00000604597 246 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RPL23AP88-201ENST00000605759 454 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU2-4P-201ENST00000606190 192 ntBASIC3.01□□□□□ -1.93
LMO1P25800 SNORD113-5-201ENST00000607261 78 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.15-201ENST00000611544 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.16-201ENST00000613119 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.12-201ENST00000613778 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.9-201ENST00000615427 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.11-201ENST00000616345 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.2-201ENST00000616535 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.3-201ENST00000617785 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.19-201ENST00000618602 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 RNU2-1-201ENST00000618664 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.6-201ENST00000619225 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.5-201ENST00000619465 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 U2.10-201ENST00000620268 191 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AP003355.3-201ENST00000623465 114 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AC048347.1-201ENST00000624621 427 ntBASIC3.01□□□□□ -1.93
LMO1P25800 snoZ196.1-201ENST00000625269 89 ntBASIC3.01□□□□□ -1.93
LMO1P25800 AL034408.1-202ENST00000636088 415 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms