Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU6-95P-201ENST00000384697 107 ntBASIC2.31□□□□□ -2.04
CDH3P22223 MIR544A-201ENST00000384855 91 ntBASIC2.31□□□□□ -2.04
CDH3P22223 MIR186-201ENST00000384988 86 ntBASIC2.31□□□□□ -2.04
CDH3P22223 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDH3P22223 EIF4EP4-201ENST00000424916 578 ntBASIC2.31□□□□□ -2.04
CDH3P22223 RNU7-187P-201ENST00000458985 68 ntBASIC2.31□□□□□ -2.04
CDH3P22223 RNU6-1037P-201ENST00000459571 107 ntBASIC2.31□□□□□ -2.04
CDH3P22223 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
CDH3P22223 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH3P22223 AC109329.1-201ENST00000518744 317 ntBASIC2.31□□□□□ -2.04
CDH3P22223 CYCSP26-201ENST00000534107 320 ntBASIC2.31□□□□□ -2.04
CDH3P22223 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH3P22223 SNORD53-201ENST00000579969 78 ntBASIC2.31□□□□□ -2.04
CDH3P22223 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH3P22223 AC073410.2-201ENST00000603240 332 ntBASIC2.31□□□□□ -2.04
CDH3P22223 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH3P22223 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH3P22223 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH3P22223 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH3P22223 CBX3P1-201ENST00000325243 554 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU6-562P-201ENST00000362731 107 ntBASIC2.3□□□□□ -2.04
CDH3P22223 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU6-1317P-201ENST00000364582 104 ntBASIC2.3□□□□□ -2.04
CDH3P22223 SNORD32A-201ENST00000364805 84 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU6-767P-201ENST00000384132 107 ntBASIC2.3□□□□□ -2.04
CDH3P22223 SNORA51.11-201ENST00000384442 131 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU1-57P-201ENST00000384491 166 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU6-510P-201ENST00000391239 108 ntBASIC2.3□□□□□ -2.04
CDH3P22223 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH3P22223 U6atac.2-201ENST00000408644 118 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RNU6-325P-201ENST00000411132 105 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AL030996.1-201ENST00000411430 235 ntBASIC2.3□□□□□ -2.04
CDH3P22223 MTND3P8-201ENST00000412909 339 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC008267.5-201ENST00000424928 265 ntBASIC2.3□□□□□ -2.04
CDH3P22223 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH3P22223 RPL39P29-201ENST00000447779 157 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH3P22223 PMCHL2-203ENST00000457791 237 ntBASIC2.3□□□□□ -2.04
CDH3P22223 snoU13.14-201ENST00000459372 104 ntBASIC2.3□□□□□ -2.04
CDH3P22223 RPS29P27-201ENST00000463711 170 ntBASIC2.3□□□□□ -2.04
CDH3P22223 TRBV12-1-201ENST00000479785 344 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC096745.1-201ENST00000509945 370 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH3P22223 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH3P22223 AC118273.2-201ENST00000532092 465 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH3P22223 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH3P22223 AC091544.4-201ENST00000555268 342 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC105245.1-201ENST00000581934 244 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AP001836.1-201ENST00000604675 523 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC013412.1-201ENST00000610687 192 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AL161423.1-201ENST00000613700 262 ntBASIC2.3□□□□□ -2.04
CDH3P22223 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC002543.1-201ENST00000299783 1954 ntBASIC2.3□□□□□ -2.04
CDH3P22223 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
CDH3P22223 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CDH3P22223 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH3P22223 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-1013P-201ENST00000384180 107 ntBASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-43P-201ENST00000384302 107 ntBASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-1222P-201ENST00000384615 107 ntBASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-1106P-201ENST00000390845 107 ntBASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-1245P-201ENST00000411130 106 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH3P22223 PDCL2P1-201ENST00000419302 352 ntBASIC2.29□□□□□ -2.04
CDH3P22223 MTND4LP16-201ENST00000440828 295 ntBASIC2.29□□□□□ -2.04
CDH3P22223 USP9YP8-201ENST00000441913 500 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH3P22223 AC124916.1-201ENST00000444020 547 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.29□□□□□ -2.04
CDH3P22223 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-566P-201ENST00000516790 107 ntBASIC2.29□□□□□ -2.04
CDH3P22223 RNU6-612P-201ENST00000516909 102 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AP005639.2-201ENST00000527592 928 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.29□□□□□ -2.04
CDH3P22223 AC105137.2-201ENST00000569073 466 ntBASIC2.29□□□□□ -2.04
CDH3P22223 CPDP1-201ENST00000579660 283 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC091135.1-201ENST00000585943 307 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC069294.1-201ENST00000608397 350 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
CDH3P22223 uc_338.15-201ENST00000615470 191 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC022306.2-201ENST00000617563 647 ntBASIC2.29□□□□□ -2.04
CDH3P22223 AC064859.1-201ENST00000624741 174 ntBASIC2.29□□□□□ -2.04
CDH3P22223 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH3P22223 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH3P22223 OR56A5-201ENST00000340110 738 ntBASIC2.28□□□□□ -2.04
CDH3P22223 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CDH3P22223 RNU6-845P-201ENST00000362578 103 ntBASIC2.28□□□□□ -2.04
CDH3P22223 RNU6-212P-201ENST00000362642 104 ntBASIC2.28□□□□□ -2.04
CDH3P22223 Y_RNA.88-201ENST00000363029 99 ntBASIC2.28□□□□□ -2.04
CDH3P22223 RNU6-1285P-201ENST00000363480 105 ntBASIC2.28□□□□□ -2.04
CDH3P22223 RNU1-91P-201ENST00000364746 163 ntBASIC2.28□□□□□ -2.04
CDH3P22223 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH3P22223 AP000275.1-201ENST00000411943 390 ntBASIC2.28□□□□□ -2.04
CDH3P22223 AIMP1P2-201ENST00000425294 312 ntBASIC2.28□□□□□ -2.04
CDH3P22223 AL645568.3-201ENST00000433683 316 ntBASIC2.28□□□□□ -2.04
CDH3P22223 GPM6BP3-201ENST00000442797 145 ntBASIC2.28□□□□□ -2.04
CDH3P22223 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms