Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RNU6-1285P-201ENST00000363480 105 ntBASIC2.6□□□□□ -1.99
PCNAP12004 RNU6-461P-201ENST00000364195 107 ntBASIC2.6□□□□□ -1.99
PCNAP12004 RNU1-112P-201ENST00000364401 164 ntBASIC2.6□□□□□ -1.99
PCNAP12004 RNU6-593P-201ENST00000364716 112 ntBASIC2.6□□□□□ -1.99
PCNAP12004 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
PCNAP12004 Y_RNA.646-201ENST00000410980 101 ntBASIC2.6□□□□□ -1.99
PCNAP12004 BX276092.3-201ENST00000424182 230 ntBASIC2.6□□□□□ -1.99
PCNAP12004 RPL23AP95-201ENST00000426806 265 ntBASIC2.6□□□□□ -1.99
PCNAP12004 AL445687.1-201ENST00000439946 251 ntBASIC2.6□□□□□ -1.99
PCNAP12004 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
PCNAP12004 MTCO3P10-201ENST00000455912 772 ntBASIC2.6□□□□□ -1.99
PCNAP12004 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.6□□□□□ -1.99
PCNAP12004 RNA5SP112-201ENST00000515937 99 ntBASIC2.6□□□□□ -1.99
PCNAP12004 RNU6-120P-201ENST00000516077 103 ntBASIC2.6□□□□□ -1.99
PCNAP12004 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.6□□□□□ -1.99
PCNAP12004 COX6CP5-201ENST00000527162 228 ntBASIC2.6□□□□□ -1.99
PCNAP12004 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.6□□□□□ -1.99
PCNAP12004 MIR3200-201ENST00000580767 85 ntBASIC2.6□□□□□ -1.99
PCNAP12004 AL158827.2-201ENST00000602494 330 ntBASIC2.6□□□□□ -1.99
PCNAP12004 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
PCNAP12004 HMGB1P24-202ENST00000615653 685 ntBASIC2.6□□□□□ -1.99
PCNAP12004 AC007792.1-201ENST00000623023 402 ntBASIC2.6□□□□□ -1.99
PCNAP12004 AL691447.3-201ENST00000635020 330 ntBASIC2.6□□□□□ -1.99
PCNAP12004 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
PCNAP12004 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.6□□□□□ -1.99
PCNAP12004 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCNAP12004 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.59□□□□□ -1.99
PCNAP12004 RNU1-72P-201ENST00000362976 153 ntBASIC2.59□□□□□ -1.99
PCNAP12004 RNU6-1141P-201ENST00000364520 107 ntBASIC2.59□□□□□ -1.99
PCNAP12004 Y_RNA.259-201ENST00000364619 101 ntBASIC2.59□□□□□ -1.99
PCNAP12004 Y_RNA.419-201ENST00000384041 102 ntBASIC2.59□□□□□ -1.99
PCNAP12004 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
PCNAP12004 Y_RNA.533-201ENST00000384596 114 ntBASIC2.59□□□□□ -1.99
PCNAP12004 RNU6-310P-201ENST00000384655 107 ntBASIC2.59□□□□□ -1.99
PCNAP12004 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.59□□□□□ -1.99
PCNAP12004 EIF4EP4-201ENST00000424916 578 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AIMP1P2-201ENST00000425294 312 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
PCNAP12004 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.59□□□□□ -1.99
PCNAP12004 AC079354.2-201ENST00000453523 154 ntBASIC2.59□□□□□ -1.99
PCNAP12004 RPL30P15-201ENST00000457129 321 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC073901.1-201ENST00000462471 408 ntBASIC2.59□□□□□ -1.99
PCNAP12004 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
PCNAP12004 RNU2-53P-201ENST00000516257 147 ntBASIC2.59□□□□□ -1.99
PCNAP12004 Y_RNA.718-201ENST00000517110 102 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.59□□□□□ -1.99
PCNAP12004 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC060766.3-201ENST00000591442 263 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC135507.2-201ENST00000612443 309 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC084781.2-201ENST00000615568 161 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AC098657.3-201ENST00000620434 263 ntBASIC2.59□□□□□ -1.99
PCNAP12004 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.59□□□□□ -1.99
PCNAP12004 AL450472.1-202ENST00000637286 180 ntBASIC2.59□□□□□ -1.99
PCNAP12004 ZNF271P-202ENST00000465539 1970 ntBASIC2.59□□□□□ -2
PCNAP12004 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -2
PCNAP12004 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.58□□□□□ -2
PCNAP12004 AL365361.1-201ENST00000566942 3481 ntBASIC2.58□□□□□ -2
PCNAP12004 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCNAP12004 RNU6-486P-201ENST00000363116 107 ntBASIC2.58□□□□□ -2
PCNAP12004 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
PCNAP12004 RNU6-1032P-201ENST00000384100 107 ntBASIC2.58□□□□□ -2
PCNAP12004 RNY4P36-201ENST00000391116 96 ntBASIC2.58□□□□□ -2
PCNAP12004 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
PCNAP12004 RNU6-174P-201ENST00000410406 106 ntBASIC2.58□□□□□ -2
PCNAP12004 AL590135.1-201ENST00000422215 156 ntBASIC2.58□□□□□ -2
PCNAP12004 AC019205.3-201ENST00000424573 156 ntBASIC2.58□□□□□ -2
PCNAP12004 AC244670.1-201ENST00000436879 112 ntBASIC2.58□□□□□ -2
PCNAP12004 AC016700.2-201ENST00000446011 156 ntBASIC2.58□□□□□ -2
PCNAP12004 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.58□□□□□ -2
PCNAP12004 SNORD19B-201ENST00000459623 84 ntBASIC2.58□□□□□ -2
PCNAP12004 AL121594.1-201ENST00000475906 575 ntBASIC2.58□□□□□ -2
PCNAP12004 RPL22P13-201ENST00000493291 347 ntBASIC2.58□□□□□ -2
PCNAP12004 AC015911.1-201ENST00000495111 156 ntBASIC2.58□□□□□ -2
PCNAP12004 AC114801.2-201ENST00000503825 781 ntBASIC2.58□□□□□ -2
PCNAP12004 AC005741.1-201ENST00000511094 432 ntBASIC2.58□□□□□ -2
PCNAP12004 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
PCNAP12004 SCARNA16.2-201ENST00000516520 172 ntBASIC2.58□□□□□ -2
PCNAP12004 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.58□□□□□ -2
PCNAP12004 CBX3P8-201ENST00000532412 525 ntBASIC2.58□□□□□ -2
PCNAP12004 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
PCNAP12004 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
PCNAP12004 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.58□□□□□ -2
PCNAP12004 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.58□□□□□ -2
PCNAP12004 MIR4273-201ENST00000582824 84 ntBASIC2.58□□□□□ -2
PCNAP12004 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.58□□□□□ -2
PCNAP12004 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.58□□□□□ -2
PCNAP12004 PISRT1.1-201ENST00000616930 107 ntBASIC2.58□□□□□ -2
PCNAP12004 AC006026.1-201ENST00000444025 1803 ntBASIC2.58□□□□□ -2
PCNAP12004 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
PCNAP12004 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
PCNAP12004 OR56A5-201ENST00000340110 738 ntBASIC2.57□□□□□ -2
PCNAP12004 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
PCNAP12004 RNU6-784P-201ENST00000384330 106 ntBASIC2.57□□□□□ -2
PCNAP12004 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
PCNAP12004 MTCYBP4-201ENST00000401524 249 ntBASIC2.57□□□□□ -2
PCNAP12004 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
PCNAP12004 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.57□□□□□ -2
PCNAP12004 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
PCNAP12004 GPM6BP3-201ENST00000442797 145 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 454.9 ms