Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RPL22P22-201ENST00000395439 379 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-1.15□□□□□ -2.59
TOP2AP11388 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 RNU6-782P-201ENST00000516852 104 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-1.15□□□□□ -2.59
TOP2AP11388 AL136317.1-201ENST00000612653 226 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 AC104985.3-201ENST00000623479 597 ntBASIC-1.15□□□□□ -2.59
TOP2AP11388 ATM-228ENST00000639240 498 ntTSL 5 BASIC-1.15□□□□□ -2.59
TOP2AP11388 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 RNU6-480P-201ENST00000384332 107 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 SNORD116-13-201ENST00000384408 92 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 RNU6-679P-201ENST00000391003 106 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 PCNPP3-201ENST00000393579 471 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 MIR1302-8-201ENST00000408342 128 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 RNU6-233P-201ENST00000410845 141 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-1.16□□□□□ -2.6
TOP2AP11388 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-1.16□□□□□ -2.6
TOP2AP11388 AC087499.4-201ENST00000448505 178 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 RBBP4P6-201ENST00000508098 202 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 RNA5SP481-201ENST00000516814 122 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 RNU6-1096P-201ENST00000517089 102 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-1.16□□□□□ -2.6
TOP2AP11388 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
TOP2AP11388 UBE2Q2P6-201ENST00000612666 153 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 AC116165.2-201ENST00000616705 206 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-1.16□□□□□ -2.6
TOP2AP11388 MIR4788-201ENST00000639104 80 ntBASIC-1.16□□□□□ -2.6
TOP2AP11388 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
TOP2AP11388 SNORA75.6-201ENST00000391318 127 ntBASIC-1.17□□□□□ -2.6
TOP2AP11388 AL353621.1-201ENST00000418219 243 ntBASIC-1.17□□□□□ -2.6
TOP2AP11388 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-1.17□□□□□ -2.6
TOP2AP11388 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.17□□□□□ -2.6
TOP2AP11388 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
TOP2AP11388 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-1.17□□□□□ -2.6
TOP2AP11388 AC012213.3-201ENST00000577199 777 ntBASIC-1.17□□□□□ -2.6
TOP2AP11388 AF038458.1-201ENST00000588406 262 ntBASIC-1.17□□□□□ -2.6
TOP2AP11388 AC073968.1-201ENST00000618594 637 ntBASIC-1.17□□□□□ -2.6
TOP2AP11388 RNU4-32P-201ENST00000363404 141 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 SNORD105-201ENST00000386910 85 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 USP9YP19-201ENST00000412165 485 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-1.18□□□□□ -2.6
TOP2AP11388 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-1.18□□□□□ -2.6
TOP2AP11388 MIR3167-201ENST00000579623 85 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 AC091152.3-201ENST00000604227 325 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 AC013244.3-201ENST00000605614 388 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 uc_338.28-201ENST00000612082 187 ntBASIC-1.18□□□□□ -2.6
TOP2AP11388 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-1.18□□□□□ -2.6
TOP2AP11388 MIR412-201ENST00000362142 91 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 MIR18A-201ENST00000362310 71 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 Y_RNA.99-201ENST00000363138 105 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 RNU6-452P-201ENST00000384406 107 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-1.19□□□□□ -2.6
TOP2AP11388 AC008494.2-201ENST00000514544 370 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 RNA5SP437-201ENST00000517249 129 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 RNU6-586P-201ENST00000517265 104 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 AL442163.3-201ENST00000554110 156 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 AF129408.1-201ENST00000608767 431 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 U6.48-201ENST00000618523 106 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 AC015726.2-201ENST00000620112 122 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 AC107982.1-201ENST00000507171 1300 ntBASIC-1.19□□□□□ -2.6
TOP2AP11388 RNU6-1226P-201ENST00000384317 107 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 RNU6-140P-201ENST00000384566 108 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 MTCO1P20-201ENST00000425366 358 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 AC109445.1-201ENST00000512356 383 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-1.2□□□□□ -2.6
TOP2AP11388 SNORA25.18-201ENST00000607153 114 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 AC130454.1-201ENST00000622948 401 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 Z82210.1-201ENST00000440037 231 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-1.2□□□□□ -2.6
TOP2AP11388 AC092001.1-201ENST00000453012 261 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-1.2□□□□□ -2.6
TOP2AP11388 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.2□□□□□ -2.6
TOP2AP11388 AC022616.3-201ENST00000523940 148 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 AL133445.2-201ENST00000611191 527 ntBASIC-1.2□□□□□ -2.6
TOP2AP11388 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-1.21□□□□□ -2.6
TOP2AP11388 RPL31P53-201ENST00000457065 348 ntBASIC-1.21□□□□□ -2.6
TOP2AP11388 AC130509.1-201ENST00000464158 433 ntBASIC-1.21□□□□□ -2.6
TOP2AP11388 AC113398.2-201ENST00000507630 558 ntBASIC-1.21□□□□□ -2.6
TOP2AP11388 AC022868.1-201ENST00000517767 391 ntBASIC-1.21□□□□□ -2.6
TOP2AP11388 MIR5697-201ENST00000578045 78 ntBASIC-1.21□□□□□ -2.6
TOP2AP11388 AC015688.2-201ENST00000584523 262 ntBASIC-1.21□□□□□ -2.6
TOP2AP11388 SNORA25.7-201ENST00000364375 127 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 RNU6-10P-201ENST00000384036 107 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 RNU6-15P-201ENST00000384534 107 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
TOP2AP11388 RNU2-59P-201ENST00000410482 191 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 RPL36P19-201ENST00000430744 301 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 AC003071.1-201ENST00000451219 789 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-1.22□□□□□ -2.6
TOP2AP11388 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-1.22□□□□□ -2.6
TOP2AP11388 MIR6738-201ENST00000619620 64 ntBASIC-1.22□□□□□ -2.6
TOP2AP11388 RNU6-697P-201ENST00000363348 107 ntBASIC-1.23□□□□□ -2.61
TOP2AP11388 Y_RNA.362-201ENST00000365518 110 ntBASIC-1.23□□□□□ -2.61
TOP2AP11388 RNU6-160P-201ENST00000384591 107 ntBASIC-1.23□□□□□ -2.61
TOP2AP11388 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.23□□□□□ -2.61
TOP2AP11388 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-1.23□□□□□ -2.61
TOP2AP11388 AC011005.2-201ENST00000487324 359 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms