Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MTCO3P28-201ENST00000513351 515 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 RNU6-1092P-201ENST00000516955 87 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AC090142.3-201ENST00000519012 385 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
FREM3P0C091 AC124016.2-201ENST00000610058 665 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
FREM3P0C091 AL589826.1-201ENST00000340697 249 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 RNU6-296P-201ENST00000384608 107 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.48□□□□□ -2.33
FREM3P0C091 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.48□□□□□ -2.33
FREM3P0C091 C8orf59P1-201ENST00000429930 303 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 OR2AQ1P-201ENST00000451972 200 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.48□□□□□ -2.33
FREM3P0C091 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.48□□□□□ -2.33
FREM3P0C091 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.48□□□□□ -2.33
FREM3P0C091 AL359547.2-201ENST00000615810 418 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.48□□□□□ -2.33
FREM3P0C091 AC068787.1-201ENST00000623908 691 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 AC010615.1-201ENST00000594254 1764 ntBASIC0.48□□□□□ -2.33
FREM3P0C091 RNU6-78P-201ENST00000362897 107 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 RNU5E-6P-201ENST00000365574 115 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 Y_RNA.472-201ENST00000384322 102 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 MIR10A-201ENST00000385043 110 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AL356776.1-201ENST00000406574 447 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.47□□□□□ -2.33
FREM3P0C091 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
FREM3P0C091 AC010587.2-201ENST00000511727 448 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 PSMC1P5-201ENST00000512850 177 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 RNA5SP476-201ENST00000516613 103 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.47□□□□□ -2.33
FREM3P0C091 OR8K2P-201ENST00000524645 927 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.47□□□□□ -2.33
FREM3P0C091 AL354696.1-201ENST00000614652 497 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 FRG1KP-201ENST00000623592 341 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.47□□□□□ -2.33
FREM3P0C091 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
FREM3P0C091 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
FREM3P0C091 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 Y_RNA.578-201ENST00000390903 88 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 RN7SKP200-201ENST00000410564 320 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 HSPE1P9-201ENST00000440046 311 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.47□□□□□ -2.33
FREM3P0C091 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.47□□□□□ -2.33
FREM3P0C091 snoU13.30-201ENST00000458951 104 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.47□□□□□ -2.33
FREM3P0C091 AC097473.1-201ENST00000508142 408 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 RNU6-322P-201ENST00000516010 103 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AP003049.1-201ENST00000529418 457 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 U6.42-201ENST00000618440 107 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 AL512427.1-201ENST00000618593 349 ntBASIC0.47□□□□□ -2.33
FREM3P0C091 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.46□□□□□ -2.34
FREM3P0C091 RNU2-64P-201ENST00000411315 191 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.46□□□□□ -2.34
FREM3P0C091 ELOCP17-201ENST00000414751 326 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 MTCO3P41-201ENST00000414801 328 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 ELOCP9-201ENST00000418624 239 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.46□□□□□ -2.34
FREM3P0C091 RPS27AP8-201ENST00000452665 445 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 MTATP6P25-201ENST00000574491 261 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC015688.6-201ENST00000577737 104 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 MIR4653-201ENST00000585107 83 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 BNIP3P16-201ENST00000589779 534 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC068790.6-201ENST00000602558 258 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC068620.3-201ENST00000602749 560 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC105129.3-201ENST00000605455 485 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 RNU6-87P-201ENST00000607561 108 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.46□□□□□ -2.34
FREM3P0C091 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.46□□□□□ -2.34
FREM3P0C091 AC103706.2-201ENST00000638080 240 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
FREM3P0C091 Y_RNA.458-201ENST00000384240 102 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 MIR548B-201ENST00000385247 97 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 RPS3AP36-201ENST00000398190 775 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 RNU2-70P-201ENST00000410718 179 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AL606490.4-201ENST00000423117 127 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 USP9YP11-201ENST00000427537 717 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.46□□□□□ -2.34
FREM3P0C091 AL008629.1-201ENST00000438615 184 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.46□□□□□ -2.34
FREM3P0C091 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.46□□□□□ -2.34
FREM3P0C091 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.46□□□□□ -2.34
FREM3P0C091 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.46□□□□□ -2.34
FREM3P0C091 AC112206.3-201ENST00000514578 389 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 AC131235.4-201ENST00000609288 620 ntBASIC0.46□□□□□ -2.34
FREM3P0C091 RNA5SP259-201ENST00000365541 109 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 RNU6-16P-201ENST00000384385 107 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 SNORA40.2-201ENST00000390847 128 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 AL117342.1-201ENST00000404861 406 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 RNU2-3P-201ENST00000410144 191 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 RAB28P5-201ENST00000427490 651 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 AC113347.3-201ENST00000509113 148 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 AP001893.2-201ENST00000526949 202 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 AC109446.1-201ENST00000566172 220 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 AC107304.1-201ENST00000604229 296 ntBASIC0.45□□□□□ -2.34
FREM3P0C091 MIR8087-201ENST00000612745 78 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms