Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-169P-201ENST00000365336 107 ntBASIC1□□□□□ -2.25
COL4A2P08572 RNU6-1222P-201ENST00000384615 107 ntBASIC1□□□□□ -2.25
COL4A2P08572 MIR1-2-201ENST00000384961 85 ntBASIC1□□□□□ -2.25
COL4A2P08572 AL031577.2-201ENST00000404133 280 ntBASIC1□□□□□ -2.25
COL4A2P08572 MIR1283-2-201ENST00000408621 87 ntBASIC1□□□□□ -2.25
COL4A2P08572 RNU6-1245P-201ENST00000411130 106 ntBASIC1□□□□□ -2.25
COL4A2P08572 RNU6-607P-201ENST00000411283 108 ntBASIC1□□□□□ -2.25
COL4A2P08572 OR9R1P-201ENST00000412200 877 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1□□□□□ -2.25
COL4A2P08572 HIGD1AP15-201ENST00000416198 280 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC244636.1-201ENST00000421152 228 ntBASIC1□□□□□ -2.25
COL4A2P08572 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
COL4A2P08572 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1□□□□□ -2.25
COL4A2P08572 CBX3P6-201ENST00000430257 527 ntBASIC1□□□□□ -2.25
COL4A2P08572 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1□□□□□ -2.25
COL4A2P08572 EPS15P1-201ENST00000448836 336 ntBASIC1□□□□□ -2.25
COL4A2P08572 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL4A2P08572 MTCO3P7-201ENST00000510008 774 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1□□□□□ -2.25
COL4A2P08572 RNU6-377P-201ENST00000515965 102 ntBASIC1□□□□□ -2.25
COL4A2P08572 RNU6-667P-201ENST00000517186 102 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1□□□□□ -2.25
COL4A2P08572 AP005639.2-201ENST00000527592 928 ntBASIC1□□□□□ -2.25
COL4A2P08572 AP003072.2-201ENST00000527756 676 ntBASIC1□□□□□ -2.25
COL4A2P08572 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
COL4A2P08572 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
COL4A2P08572 CYP3A137P-201ENST00000562436 69 ntBASIC1□□□□□ -2.25
COL4A2P08572 SUB1P4-201ENST00000566062 339 ntBASIC1□□□□□ -2.25
COL4A2P08572 MIR4299-201ENST00000577899 72 ntBASIC1□□□□□ -2.25
COL4A2P08572 MIR4713-201ENST00000582691 75 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC243960.4-201ENST00000600532 288 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC008945.2-201ENST00000606056 604 ntBASIC1□□□□□ -2.25
COL4A2P08572 AC027449.1-201ENST00000608890 407 ntBASIC1□□□□□ -2.25
COL4A2P08572 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL4A2P08572 RNU6-37P-201ENST00000362692 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNA5SP62-201ENST00000363457 110 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-11P-201ENST00000364234 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-25P-201ENST00000383873 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 Y_RNA.393-201ENST00000383936 102 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-48P-201ENST00000384161 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-16P-201ENST00000384385 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-15P-201ENST00000384534 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-29P-201ENST00000384637 107 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL4A2P08572 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL4A2P08572 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A2P08572 RPS15AP10-201ENST00000432472 382 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 MTATP6P16-201ENST00000434543 526 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.99□□□□□ -2.25
COL4A2P08572 RPL39P29-201ENST00000447779 157 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A2P08572 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A2P08572 RNU1-86P-201ENST00000516108 154 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 RNU1-107P-201ENST00000516617 154 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A2P08572 AC022616.3-201ENST00000523940 148 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AP001893.2-201ENST00000526949 202 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC018630.3-201ENST00000542637 96 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC022254.1-201ENST00000567857 235 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
COL4A2P08572 BNIP3P25-201ENST00000596023 559 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC008749.1-201ENST00000597650 306 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AC078795.2-201ENST00000602835 1252 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AF246928.1-201ENST00000623768 87 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 AL157786.1-207ENST00000627771 695 ntBASIC0.99□□□□□ -2.25
COL4A2P08572 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL4A2P08572 RNU6-212P-201ENST00000362642 104 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 RNU6-190P-201ENST00000384154 102 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 RNU11-5P-201ENST00000391216 129 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 RPS3AP3-201ENST00000411933 242 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AL590556.1-201ENST00000423231 483 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC073614.1-201ENST00000438690 650 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC243964.1-201ENST00000441814 261 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A2P08572 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.98□□□□□ -2.25
COL4A2P08572 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 ZNF114P1-201ENST00000453500 292 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AL122001.1-201ENST00000457027 370 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 RNA5SP57-201ENST00000459463 123 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 SNORD42A-201ENST00000459584 64 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.98□□□□□ -2.25
COL4A2P08572 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A2P08572 AC093259.1-201ENST00000509755 300 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 MTND3P5-201ENST00000512798 333 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 RN7SKP179-201ENST00000516126 217 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC087854.1-201ENST00000519706 414 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.98□□□□□ -2.25
COL4A2P08572 AP002453.2-201ENST00000533503 320 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A2P08572 AC109446.1-201ENST00000566172 220 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC002400.1-201ENST00000569310 726 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC010900.2-201ENST00000604508 210 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 Z84480.1-201ENST00000605131 311 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC024933.1-201ENST00000608472 348 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 Z82243.1-201ENST00000609432 473 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC063943.3-201ENST00000615562 356 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AC138649.3-201ENST00000622154 254 ntBASIC0.98□□□□□ -2.25
COL4A2P08572 AL391262.2-201ENST00000622466 494 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms