Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 MIR4424-201ENST00000585257 86 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AF250324.2-201ENST00000608299 610 ntBASIC1.84□□□□□ -2.11
MMP1P03956 HULC.1-201ENST00000612720 240 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AC022202.1-201ENST00000613515 211 ntBASIC1.84□□□□□ -2.11
MMP1P03956 uc_338.15-201ENST00000615470 191 ntBASIC1.84□□□□□ -2.11
MMP1P03956 uc_338.11-201ENST00000619132 160 ntBASIC1.84□□□□□ -2.11
MMP1P03956 MTND4P23-201ENST00000447723 1363 ntBASIC1.84□□□□□ -2.12
MMP1P03956 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MMP1P03956 Y_RNA.3-201ENST00000362331 103 ntBASIC1.83□□□□□ -2.12
MMP1P03956 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MMP1P03956 RNU6-1032P-201ENST00000384100 107 ntBASIC1.83□□□□□ -2.12
MMP1P03956 RNU6-517P-201ENST00000384362 110 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.83□□□□□ -2.12
MMP1P03956 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MMP1P03956 PGBD4P6-201ENST00000421501 610 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MMP1P03956 BX510359.4-201ENST00000423750 193 ntBASIC1.83□□□□□ -2.12
MMP1P03956 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 AP001025.1-201ENST00000486139 332 ntBASIC1.83□□□□□ -2.12
MMP1P03956 RPL36AP21-201ENST00000490372 323 ntBASIC1.83□□□□□ -2.12
MMP1P03956 CCDC34P1-201ENST00000507441 517 ntBASIC1.83□□□□□ -2.12
MMP1P03956 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.83□□□□□ -2.12
MMP1P03956 AC104136.1-201ENST00000512969 394 ntBASIC1.83□□□□□ -2.12
MMP1P03956 RNU2-69P-201ENST00000516061 100 ntBASIC1.83□□□□□ -2.12
MMP1P03956 RNU6-835P-201ENST00000516974 104 ntBASIC1.83□□□□□ -2.12
MMP1P03956 RNU6-586P-201ENST00000517265 104 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 AC034114.1-201ENST00000520293 285 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AC087441.2-201ENST00000529141 262 ntBASIC1.83□□□□□ -2.12
MMP1P03956 NDUFA5P6-201ENST00000542110 379 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AC245505.1-201ENST00000556398 224 ntBASIC1.83□□□□□ -2.12
MMP1P03956 MTCO3P23-201ENST00000561363 289 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.83□□□□□ -2.12
MMP1P03956 AC093249.1-201ENST00000567049 203 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP1P03956 AC012507.3-201ENST00000603556 477 ntBASIC1.83□□□□□ -2.12
MMP1P03956 AL354950.2-201ENST00000617939 290 ntBASIC1.83□□□□□ -2.12
MMP1P03956 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MMP1P03956 AC099654.12-201ENST00000639868 649 ntBASIC1.83□□□□□ -2.12
MMP1P03956 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.83□□□□□ -2.12
MMP1P03956 AC006026.1-201ENST00000444025 1803 ntBASIC1.82□□□□□ -2.12
MMP1P03956 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
MMP1P03956 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
MMP1P03956 Y_RNA.116-201ENST00000363292 103 ntBASIC1.82□□□□□ -2.12
MMP1P03956 Y_RNA.255-201ENST00000364581 97 ntBASIC1.82□□□□□ -2.12
MMP1P03956 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
MMP1P03956 MIR518E-201ENST00000385252 88 ntBASIC1.82□□□□□ -2.12
MMP1P03956 SNORD70.1-201ENST00000391007 85 ntBASIC1.82□□□□□ -2.12
MMP1P03956 SNORA46.1-201ENST00000391069 153 ntBASIC1.82□□□□□ -2.12
MMP1P03956 C8orf59P1-201ENST00000429930 303 ntBASIC1.82□□□□□ -2.12
MMP1P03956 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.82□□□□□ -2.12
MMP1P03956 HMGB1P31-201ENST00000437242 427 ntBASIC1.82□□□□□ -2.12
MMP1P03956 MTND1P1-201ENST00000445453 368 ntBASIC1.82□□□□□ -2.12
MMP1P03956 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.82□□□□□ -2.12
MMP1P03956 AC006026.2-201ENST00000457376 180 ntBASIC1.82□□□□□ -2.12
MMP1P03956 SCARNA18-201ENST00000459004 134 ntBASIC1.82□□□□□ -2.12
MMP1P03956 AC083798.1-201ENST00000472671 131 ntBASIC1.82□□□□□ -2.12
MMP1P03956 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.82□□□□□ -2.12
MMP1P03956 AC009646.1-201ENST00000510455 318 ntBASIC1.82□□□□□ -2.12
MMP1P03956 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
MMP1P03956 Y_RNA.687-201ENST00000516558 91 ntBASIC1.82□□□□□ -2.12
MMP1P03956 SNORA31.23-201ENST00000517219 133 ntBASIC1.82□□□□□ -2.12
MMP1P03956 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.82□□□□□ -2.12
MMP1P03956 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.82□□□□□ -2.12
MMP1P03956 MIR5692A1-201ENST00000580523 69 ntBASIC1.82□□□□□ -2.12
MMP1P03956 AC004223.2-201ENST00000590309 544 ntBASIC1.82□□□□□ -2.12
MMP1P03956 AL031274.2-201ENST00000599419 203 ntBASIC1.82□□□□□ -2.12
MMP1P03956 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
MMP1P03956 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
MMP1P03956 AC022418.1-201ENST00000624118 445 ntBASIC1.82□□□□□ -2.12
MMP1P03956 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
MMP1P03956 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MMP1P03956 RNU6-529P-201ENST00000363383 104 ntBASIC1.81□□□□□ -2.12
MMP1P03956 Y_RNA.372-201ENST00000365599 102 ntBASIC1.81□□□□□ -2.12
MMP1P03956 RNU6-393P-201ENST00000384475 107 ntBASIC1.81□□□□□ -2.12
MMP1P03956 SNORD116-20-201ENST00000384529 92 ntBASIC1.81□□□□□ -2.12
MMP1P03956 Y_RNA.516-201ENST00000384541 124 ntBASIC1.81□□□□□ -2.12
MMP1P03956 POLHP1-201ENST00000411806 470 ntBASIC1.81□□□□□ -2.12
MMP1P03956 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.81□□□□□ -2.12
MMP1P03956 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.81□□□□□ -2.12
MMP1P03956 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.81□□□□□ -2.12
MMP1P03956 AL365400.1-201ENST00000431854 640 ntBASIC1.81□□□□□ -2.12
MMP1P03956 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.81□□□□□ -2.12
MMP1P03956 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.81□□□□□ -2.12
MMP1P03956 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.81□□□□□ -2.12
MMP1P03956 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.81□□□□□ -2.12
MMP1P03956 SRRM1P2-201ENST00000464531 1192 ntBASIC1.81□□□□□ -2.12
MMP1P03956 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.81□□□□□ -2.12
MMP1P03956 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.81□□□□□ -2.12
MMP1P03956 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.81□□□□□ -2.12
MMP1P03956 Y_RNA.693-201ENST00000516641 110 ntBASIC1.81□□□□□ -2.12
MMP1P03956 SNORA43.2-201ENST00000516652 128 ntBASIC1.81□□□□□ -2.12
MMP1P03956 SNORA25.17-201ENST00000517184 124 ntBASIC1.81□□□□□ -2.12
MMP1P03956 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.81□□□□□ -2.12
MMP1P03956 AL137161.1-201ENST00000532231 390 ntBASIC1.81□□□□□ -2.12
MMP1P03956 BNIP3P6-201ENST00000549284 499 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms