Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU7-187P-201ENST00000458985 68 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RPL23AP49-201ENST00000492925 468 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RN7SL636P-201ENST00000497504 294 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 AK3P2-201ENST00000507976 429 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC026371.1-201ENST00000551867 419 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 TRAV32-201ENST00000553993 340 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC022306.2-201ENST00000617563 647 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC241585.2-209ENST00000638217 143 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND1P03886 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
MT-ND1P03886 Y_RNA.40-201ENST00000362645 93 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 SNORA72.1-201ENST00000363485 129 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 RNU6-487P-201ENST00000365430 104 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 RNU1-57P-201ENST00000384491 166 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 RNU6-510P-201ENST00000391239 108 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND1P03886 EDDM3CP-201ENST00000415977 425 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC009963.1-201ENST00000417265 157 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.06□□□□□ -2.08
MT-ND1P03886 MTATP6P23-201ENST00000440153 476 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.06□□□□□ -2.08
MT-ND1P03886 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND1P03886 AC006026.2-201ENST00000457376 180 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 RPL30P12-201ENST00000474666 353 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND1P03886 RNU7-30P-201ENST00000516835 62 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 SNORA48.11-201ENST00000517015 89 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC109329.1-201ENST00000518744 317 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND1P03886 AC121758.2-201ENST00000553271 193 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND1P03886 AC073410.2-201ENST00000603240 332 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AL713866.2-201ENST00000603579 219 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AC009314.1-201ENST00000603871 304 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND1P03886 AC093913.1-201ENST00000614178 329 ntBASIC2.06□□□□□ -2.08
MT-ND1P03886 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND1P03886 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
MT-ND1P03886 RNU6-562P-201ENST00000362731 107 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 RNU6-1010P-201ENST00000362757 107 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 RNU6-128P-201ENST00000383976 107 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 RNU6-214P-201ENST00000384130 107 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 MIR544A-201ENST00000384855 91 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.05□□□□□ -2.08
MT-ND1P03886 AL591043.1-201ENST00000432461 424 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 SNAP23P1-201ENST00000433229 246 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.05□□□□□ -2.08
MT-ND1P03886 RPS29P27-201ENST00000463711 170 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 RNU6-566P-201ENST00000516790 107 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.05□□□□□ -2.08
MT-ND1P03886 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.05□□□□□ -2.08
MT-ND1P03886 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.05□□□□□ -2.08
MT-ND1P03886 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.05□□□□□ -2.08
MT-ND1P03886 AL121579.1-201ENST00000555129 305 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 MIR5002-201ENST00000584713 97 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 AL160281.1-201ENST00000605307 311 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 MTND4P23-201ENST00000447723 1363 ntBASIC2.05□□□□□ -2.08
MT-ND1P03886 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
MT-ND1P03886 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
MT-ND1P03886 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
MT-ND1P03886 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
MT-ND1P03886 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
MT-ND1P03886 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
MT-ND1P03886 Y_RNA.151-201ENST00000363566 112 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 Y_RNA.184-201ENST00000363884 108 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 RNU6-1317P-201ENST00000364582 104 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 SNORD81.2-201ENST00000365153 76 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
MT-ND1P03886 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
MT-ND1P03886 RNA5SP390-201ENST00000410191 113 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 RNU6-325P-201ENST00000411132 105 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AL030996.1-201ENST00000411430 235 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.04□□□□□ -2.08
MT-ND1P03886 UBE2V1P4-201ENST00000425374 344 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 USP9YP8-201ENST00000441913 500 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.04□□□□□ -2.08
MT-ND1P03886 PPP1R2P5-201ENST00000457256 603 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 RNU6-1037P-201ENST00000459571 107 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.04□□□□□ -2.08
MT-ND1P03886 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
MT-ND1P03886 AC091874.1-201ENST00000511402 339 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AC046134.1-201ENST00000514454 666 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 Y_RNA.682-201ENST00000516457 100 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms