Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL031313.1-201ENST00000448435 256 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.06□□□□□ -2.42
SPTA1P02549 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC112492.4-201ENST00000456549 352 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AC110760.3-202ENST00000515177 371 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC109810.1-201ENST00000534066 224 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AC005261.5-201ENST00000596280 355 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AL590229.1-201ENST00000603497 542 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL118556.2-201ENST00000614375 824 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL391994.1-201ENST00000254724 282 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC092268.1-201ENST00000342691 405 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 MIRLET7D-201ENST00000362263 87 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 RNU6-296P-201ENST00000384608 107 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 SNORA12-201ENST00000391162 147 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 DAP3P1-201ENST00000441522 278 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.07□□□□□ -2.42
SPTA1P02549 MIR4637-201ENST00000582405 84 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 VN1R83P-201ENST00000595685 445 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AP000484.1-201ENST00000620067 1252 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC104820.1-201ENST00000624183 307 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 U6.99-201ENST00000637524 83 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 RNU6-637P-201ENST00000384050 107 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 SNORA48.1-201ENST00000390879 135 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.07□□□□□ -2.42
SPTA1P02549 RPL31P54-201ENST00000429803 370 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.07□□□□□ -2.42
SPTA1P02549 AL606517.1-201ENST00000446914 387 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.07□□□□□ -2.42
SPTA1P02549 AC023194.1-201ENST00000493084 308 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC048346.1-201ENST00000510247 144 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC022868.1-201ENST00000517767 391 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AL356057.1-201ENST00000533798 831 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 MRPS36P5-201ENST00000551909 298 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC098483.2-201ENST00000603158 454 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 BX284668.6-201ENST00000606899 438 ntBASIC-0.07□□□□□ -2.42
SPTA1P02549 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.07□□□□□ -2.42
SPTA1P02549 AC010615.1-201ENST00000594254 1764 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU6-877P-201ENST00000383868 107 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU6-969P-201ENST00000383900 105 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 MIR520F-201ENST00000384824 87 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 CALM2P3-201ENST00000400429 449 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.08□□□□□ -2.42
SPTA1P02549 BRK1P2-201ENST00000442875 223 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU7-59P-201ENST00000459101 61 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.08□□□□□ -2.42
SPTA1P02549 AC116655.1-201ENST00000508324 901 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC079140.3-201ENST00000511111 550 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC016256.1-201ENST00000547971 354 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC018926.1-201ENST00000616335 435 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 MIR6755-201ENST00000619993 66 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC078938.1-201ENST00000620993 318 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
SPTA1P02549 MIR103A2-201ENST00000362154 78 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU4-32P-201ENST00000363404 141 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU6-432P-201ENST00000384196 109 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 SNORA16.2-201ENST00000390991 127 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RNA5SP496-201ENST00000391240 109 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
SPTA1P02549 AL133475.1-201ENST00000404414 305 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.08□□□□□ -2.42
SPTA1P02549 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.08□□□□□ -2.42
SPTA1P02549 AC011233.1-201ENST00000422812 283 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.08□□□□□ -2.42
SPTA1P02549 RPL18AP17-201ENST00000455326 198 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 MTND2P33-201ENST00000506452 1031 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC138915.2-201ENST00000569776 97 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AF038458.1-201ENST00000588406 262 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AC107304.1-201ENST00000604229 296 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 RAC1P9-201ENST00000604990 392 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AL390208.1-201ENST00000605885 644 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 AL078595.3-201ENST00000623815 1166 ntBASIC-0.08□□□□□ -2.42
SPTA1P02549 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.08□□□□□ -2.42
SPTA1P02549 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 SNORA4.2-201ENST00000365313 147 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 RNU6-657P-201ENST00000383904 107 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 MIR520A-201ENST00000384862 85 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 SNORD12-201ENST00000391002 90 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AC093422.3-201ENST00000428506 305 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 MTND2P21-201ENST00000436242 1042 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 HMGN1P12-201ENST00000499125 195 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.09□□□□□ -2.42
SPTA1P02549 RNU6-714P-201ENST00000516963 103 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AC091163.3-201ENST00000518269 1144 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPTA1P02549 AC022523.2-201ENST00000561045 150 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AC112487.2-201ENST00000637950 304 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AL079343.1-201ENST00000572358 1771 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 RNU6V-201ENST00000384105 107 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 MIR29B2-201ENST00000385055 81 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms