Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 MT-TW-201ENST00000387382 68 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 SNORA40C-201ENST00000391285 128 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 PGBD4P6-201ENST00000421501 610 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AC003685.2-201ENST00000422795 395 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 RPL21P40-201ENST00000428586 483 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 ARL5AP4-201ENST00000430731 512 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP3BO95985 AL583843.1-201ENST00000456070 346 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 RNU6-1037P-201ENST00000459571 107 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AC133134.1-201ENST00000466800 359 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AP004217.1-201ENST00000480579 346 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 RNU6-572P-201ENST00000516724 80 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.04□□□□□ -1.92
TOP3BO95985 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.04□□□□□ -1.92
TOP3BO95985 AC004584.2-201ENST00000570407 410 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 VN1R91P-201ENST00000594377 169 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.04□□□□□ -1.92
TOP3BO95985 RAC1P9-201ENST00000604990 392 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 RNU6-6P-201ENST00000606623 107 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 HMGB1P24-202ENST00000615653 685 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AC078938.1-201ENST00000620993 318 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AC007318.2-201ENST00000620999 243 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP3BO95985 U6.99-201ENST00000637524 83 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TOP3BO95985 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
TOP3BO95985 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TOP3BO95985 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TOP3BO95985 RPL9P7-201ENST00000330965 580 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 Y_RNA.526-201ENST00000384572 110 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 Y_RNA.551-201ENST00000384661 102 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 RNA5SP38-201ENST00000410750 119 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 Y_RNA.623-201ENST00000411128 95 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AL139281.1-201ENST00000422120 335 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 ELOCP20-201ENST00000422460 345 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AC098614.2-201ENST00000426040 255 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AL627311.1-201ENST00000431514 115 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AL513043.1-201ENST00000439124 535 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AL078601.1-201ENST00000444542 271 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 NDUFB1P2-201ENST00000449477 176 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 RNU6-1132P-201ENST00000459214 107 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 RNU7-169P-201ENST00000459456 61 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 RPL9P9-202ENST00000466501 579 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 SNORA25.11-201ENST00000515935 105 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 SNORA31.1-201ENST00000515993 133 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 SNORA31.5-201ENST00000516190 133 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 Y_RNA.680-201ENST00000516441 93 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 RNU6-711P-201ENST00000517255 106 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.03□□□□□ -1.92
TOP3BO95985 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.03□□□□□ -1.92
TOP3BO95985 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AC144568.1-201ENST00000520139 137 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 HMGB1P14-201ENST00000557424 591 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.03□□□□□ -1.92
TOP3BO95985 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.03□□□□□ -1.92
TOP3BO95985 MIR3609-201ENST00000582661 80 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AC009314.1-201ENST00000603871 304 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AP000787.2-201ENST00000604432 568 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
TOP3BO95985 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.03□□□□□ -1.92
TOP3BO95985 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.03□□□□□ -1.92
TOP3BO95985 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.03□□□□□ -1.92
TOP3BO95985 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
TOP3BO95985 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
TOP3BO95985 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TOP3BO95985 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TOP3BO95985 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.02□□□□□ -1.93
TOP3BO95985 Y_RNA.26-201ENST00000362539 101 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 RNU6-884P-201ENST00000363889 107 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 SNORD14B-201ENST00000364533 90 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 RNU6-827P-201ENST00000365553 106 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 Y_RNA.483-201ENST00000384380 101 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 SNORA51.11-201ENST00000384442 131 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 Y_RNA.552-201ENST00000384665 112 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TOP3BO95985 MIR1302-6-201ENST00000408466 90 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 RN7SKP220-201ENST00000410611 288 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 SNORD56-201ENST00000413522 71 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 HMGN2P30-201ENST00000423237 256 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 TOMM20P4-201ENST00000427861 435 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.02□□□□□ -1.93
TOP3BO95985 RPL37P4-201ENST00000448908 268 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 AC092798.1-201ENST00000458542 409 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.02□□□□□ -1.93
TOP3BO95985 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 AMZ2P1-203ENST00000565833 850 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.02□□□□□ -1.93
TOP3BO95985 AC090517.1-201ENST00000569307 266 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 MIR5701-3-201ENST00000578890 82 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 MIR5701-1-201ENST00000585138 82 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 AL645944.1-201ENST00000603857 493 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 HSPE1P7-201ENST00000604681 321 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 MIR5701-2-201ENST00000615634 82 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TOP3BO95985 ZNF299P-201ENST00000406845 1804 ntBASIC3.02□□□□□ -1.93
TOP3BO95985 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
TOP3BO95985 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms