Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.39□□□□□ -2.19
SNX4O95219 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.39□□□□□ -2.19
SNX4O95219 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.39□□□□□ -2.19
SNX4O95219 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
SNX4O95219 AC073614.1-201ENST00000438690 650 ntBASIC1.39□□□□□ -2.19
SNX4O95219 ATP5J2P3-201ENST00000451550 258 ntBASIC1.39□□□□□ -2.19
SNX4O95219 SNRPFP4-201ENST00000456366 242 ntBASIC1.39□□□□□ -2.19
SNX4O95219 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
SNX4O95219 RNU6-1178P-201ENST00000516674 107 ntBASIC1.39□□□□□ -2.19
SNX4O95219 RNU6-567P-201ENST00000516746 107 ntBASIC1.39□□□□□ -2.19
SNX4O95219 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.39□□□□□ -2.19
SNX4O95219 HSPE1P4-201ENST00000550617 308 ntBASIC1.39□□□□□ -2.19
SNX4O95219 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
SNX4O95219 AC083806.3-201ENST00000614016 455 ntBASIC1.39□□□□□ -2.19
SNX4O95219 AL078604.3-201ENST00000615580 211 ntBASIC1.39□□□□□ -2.19
SNX4O95219 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNX4O95219 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNX4O95219 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
SNX4O95219 Y_RNA.140-201ENST00000363474 103 ntBASIC1.38□□□□□ -2.19
SNX4O95219 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
SNX4O95219 RNU6-1065P-201ENST00000384513 106 ntBASIC1.38□□□□□ -2.19
SNX4O95219 SNORA17.3-201ENST00000391159 129 ntBASIC1.38□□□□□ -2.19
SNX4O95219 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC069257.2-201ENST00000441819 155 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AL022238.1-201ENST00000442557 355 ntBASIC1.38□□□□□ -2.19
SNX4O95219 TAF9P1-201ENST00000445421 515 ntBASIC1.38□□□□□ -2.19
SNX4O95219 Z73417.1-201ENST00000447373 778 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC007395.1-201ENST00000451333 677 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC013470.1-201ENST00000453438 462 ntBASIC1.38□□□□□ -2.19
SNX4O95219 TAF9P2-201ENST00000454958 515 ntBASIC1.38□□□□□ -2.19
SNX4O95219 SNORD11.1-201ENST00000459482 85 ntBASIC1.38□□□□□ -2.19
SNX4O95219 MTCYBP35-201ENST00000503630 1137 ntBASIC1.38□□□□□ -2.19
SNX4O95219 MTND3P3-201ENST00000505004 126 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.38□□□□□ -2.19
SNX4O95219 RNU5F-4P-201ENST00000516581 114 ntBASIC1.38□□□□□ -2.19
SNX4O95219 SNORA31.16-201ENST00000516773 139 ntBASIC1.38□□□□□ -2.19
SNX4O95219 RNU6-1220P-201ENST00000517126 108 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC090572.1-201ENST00000519251 160 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.38□□□□□ -2.19
SNX4O95219 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.38□□□□□ -2.19
SNX4O95219 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.38□□□□□ -2.19
SNX4O95219 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
SNX4O95219 MIR3682-201ENST00000581338 84 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC091805.2-201ENST00000603848 235 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC107304.1-201ENST00000604229 296 ntBASIC1.38□□□□□ -2.19
SNX4O95219 AC005014.3-201ENST00000605985 190 ntBASIC1.38□□□□□ -2.19
SNX4O95219 PCGEM1.1-201ENST00000613431 131 ntBASIC1.38□□□□□ -2.19
SNX4O95219 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.38□□□□□ -2.19
SNX4O95219 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.38□□□□□ -2.19
SNX4O95219 MTND5P35-201ENST00000557537 1720 ntBASIC1.37□□□□□ -2.19
SNX4O95219 RNU6-715P-201ENST00000365204 103 ntBASIC1.37□□□□□ -2.19
SNX4O95219 SNORA26.3-201ENST00000391119 136 ntBASIC1.37□□□□□ -2.19
SNX4O95219 RPS29P13-201ENST00000402041 169 ntBASIC1.37□□□□□ -2.19
SNX4O95219 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
SNX4O95219 MTATP6P19-201ENST00000413797 659 ntBASIC1.37□□□□□ -2.19
SNX4O95219 ARL5AP1-201ENST00000418991 388 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.37□□□□□ -2.19
SNX4O95219 VN1R108P-201ENST00000431580 830 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.37□□□□□ -2.19
SNX4O95219 AC002486.1-201ENST00000435098 391 ntBASIC1.37□□□□□ -2.19
SNX4O95219 UBE2D3P4-201ENST00000441973 436 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.37□□□□□ -2.19
SNX4O95219 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.37□□□□□ -2.19
SNX4O95219 RNU7-14P-201ENST00000459331 62 ntBASIC1.37□□□□□ -2.19
SNX4O95219 TOMM22P6-201ENST00000465035 409 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.37□□□□□ -2.19
SNX4O95219 AC016632.1-201ENST00000503994 196 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AC108078.1-201ENST00000508073 725 ntBASIC1.37□□□□□ -2.19
SNX4O95219 RRN3P3-201ENST00000549207 578 ntBASIC1.37□□□□□ -2.19
SNX4O95219 EIF4A1P12-201ENST00000551910 141 ntBASIC1.37□□□□□ -2.19
SNX4O95219 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AC098848.2-201ENST00000588023 330 ntBASIC1.37□□□□□ -2.19
SNX4O95219 VN1R80P-201ENST00000597126 338 ntBASIC1.37□□□□□ -2.19
SNX4O95219 AC011155.2-201ENST00000623202 216 ntBASIC1.37□□□□□ -2.19
SNX4O95219 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SNX4O95219 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SNX4O95219 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
SNX4O95219 Y_RNA.480-201ENST00000384364 102 ntBASIC1.36□□□□□ -2.19
SNX4O95219 RNU6-1026P-201ENST00000384465 108 ntBASIC1.36□□□□□ -2.19
SNX4O95219 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
SNX4O95219 RNU6-584P-201ENST00000410350 95 ntBASIC1.36□□□□□ -2.19
SNX4O95219 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
SNX4O95219 HIGD1AP15-201ENST00000416198 280 ntBASIC1.36□□□□□ -2.19
SNX4O95219 EIF1P1-201ENST00000421436 341 ntBASIC1.36□□□□□ -2.19
SNX4O95219 AL133396.1-201ENST00000432048 687 ntBASIC1.36□□□□□ -2.19
SNX4O95219 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.36□□□□□ -2.19
SNX4O95219 AC104850.1-201ENST00000435940 476 ntBASIC1.36□□□□□ -2.19
SNX4O95219 ZNF114P1-201ENST00000453500 292 ntBASIC1.36□□□□□ -2.19
SNX4O95219 AC016925.1-201ENST00000458303 298 ntBASIC1.36□□□□□ -2.19
SNX4O95219 MTCO3P7-201ENST00000510008 774 ntBASIC1.36□□□□□ -2.19
SNX4O95219 LRRC34P2-201ENST00000514850 553 ntBASIC1.36□□□□□ -2.19
SNX4O95219 RNU2-46P-201ENST00000517038 113 ntBASIC1.36□□□□□ -2.19
SNX4O95219 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
SNX4O95219 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.36□□□□□ -2.19
SNX4O95219 AP005136.1-201ENST00000579765 429 ntBASIC1.36□□□□□ -2.19
SNX4O95219 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.36□□□□□ -2.19
SNX4O95219 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.36□□□□□ -2.19
SNX4O95219 uc_338.11-201ENST00000619132 160 ntBASIC1.36□□□□□ -2.19
SNX4O95219 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SNX4O95219 RNU1-62P-201ENST00000362599 164 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms