Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 RPL23AP3-201ENST00000453844 468 ntBASIC2.61□□□□□ -1.99
CREB3O43889 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.61□□□□□ -1.99
CREB3O43889 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
CREB3O43889 AC100830.2-201ENST00000581636 240 ntBASIC2.61□□□□□ -1.99
CREB3O43889 AL078605.1-201ENST00000603529 500 ntBASIC2.61□□□□□ -1.99
CREB3O43889 AC092954.2-201ENST00000609103 430 ntBASIC2.61□□□□□ -1.99
CREB3O43889 AC064836.2-201ENST00000609491 462 ntBASIC2.61□□□□□ -1.99
CREB3O43889 AL627230.6-201ENST00000611129 280 ntBASIC2.61□□□□□ -1.99
CREB3O43889 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CREB3O43889 AC005520.5-201ENST00000613926 164 ntBASIC2.61□□□□□ -1.99
CREB3O43889 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.61□□□□□ -1.99
CREB3O43889 FER-210ENST00000628534 558 ntTSL 5 BASIC2.61□□□□□ -1.99
CREB3O43889 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.61□□□□□ -1.99
CREB3O43889 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CREB3O43889 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CREB3O43889 AC009487.4-201ENST00000624969 3585 ntBASIC2.61□□□□□ -1.99
CREB3O43889 RNU4-82P-201ENST00000362443 140 ntBASIC2.6□□□□□ -1.99
CREB3O43889 RNA5SP276-201ENST00000362580 94 ntBASIC2.6□□□□□ -1.99
CREB3O43889 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CREB3O43889 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CREB3O43889 MIR208B-201ENST00000401172 77 ntBASIC2.6□□□□□ -1.99
CREB3O43889 MIR1283-2-201ENST00000408621 87 ntBASIC2.6□□□□□ -1.99
CREB3O43889 AC016907.1-201ENST00000419483 435 ntBASIC2.6□□□□□ -1.99
CREB3O43889 AC012306.1-201ENST00000423267 114 ntBASIC2.6□□□□□ -1.99
CREB3O43889 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.6□□□□□ -1.99
CREB3O43889 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.6□□□□□ -1.99
CREB3O43889 RPL23AP6-201ENST00000446637 472 ntBASIC2.6□□□□□ -1.99
CREB3O43889 AC107222.1-201ENST00000510899 637 ntBASIC2.6□□□□□ -1.99
CREB3O43889 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.6□□□□□ -1.99
CREB3O43889 RN7SKP24-201ENST00000515888 284 ntBASIC2.6□□□□□ -1.99
CREB3O43889 Y_RNA.704-201ENST00000516851 102 ntBASIC2.6□□□□□ -1.99
CREB3O43889 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.6□□□□□ -1.99
CREB3O43889 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.6□□□□□ -1.99
CREB3O43889 AL450472.1-202ENST00000637286 180 ntBASIC2.6□□□□□ -1.99
CREB3O43889 MIR1321-201ENST00000637766 79 ntBASIC2.6□□□□□ -1.99
CREB3O43889 RNU6-1164P-201ENST00000364428 107 ntBASIC2.59□□□□□ -1.99
CREB3O43889 Y_RNA.372-201ENST00000365599 102 ntBASIC2.59□□□□□ -1.99
CREB3O43889 RNU6-128P-201ENST00000383976 107 ntBASIC2.59□□□□□ -1.99
CREB3O43889 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
CREB3O43889 USP9YP27-201ENST00000418455 438 ntBASIC2.59□□□□□ -1.99
CREB3O43889 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.59□□□□□ -1.99
CREB3O43889 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.59□□□□□ -1.99
CREB3O43889 MTCO1P29-201ENST00000496868 288 ntBASIC2.59□□□□□ -1.99
CREB3O43889 TRBVA-201ENST00000498804 316 ntBASIC2.59□□□□□ -1.99
CREB3O43889 MIR449C-201ENST00000516047 92 ntBASIC2.59□□□□□ -1.99
CREB3O43889 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
CREB3O43889 MIR6817-201ENST00000615588 66 ntBASIC2.59□□□□□ -1.99
CREB3O43889 SNORA43.4-201ENST00000629559 138 ntBASIC2.59□□□□□ -1.99
CREB3O43889 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.58□□□□□ -2
CREB3O43889 RNU6-23P-201ENST00000363283 107 ntBASIC2.58□□□□□ -2
CREB3O43889 RNA5SP68-201ENST00000363885 119 ntBASIC2.58□□□□□ -2
CREB3O43889 RNU6-522P-201ENST00000364497 107 ntBASIC2.58□□□□□ -2
CREB3O43889 RNU4-75P-201ENST00000364621 146 ntBASIC2.58□□□□□ -2
CREB3O43889 RNU6-438P-201ENST00000365561 103 ntBASIC2.58□□□□□ -2
CREB3O43889 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.58□□□□□ -2
CREB3O43889 AL033519.2-201ENST00000403958 392 ntBASIC2.58□□□□□ -2
CREB3O43889 DLGAP5P1-201ENST00000430307 464 ntBASIC2.58□□□□□ -2
CREB3O43889 HMGN2P3-201ENST00000433603 273 ntBASIC2.58□□□□□ -2
CREB3O43889 HMGN2P5-201ENST00000436882 273 ntBASIC2.58□□□□□ -2
CREB3O43889 RPL39P5-202ENST00000512505 151 ntBASIC2.58□□□□□ -2
CREB3O43889 RNA5SP148-201ENST00000516527 94 ntBASIC2.58□□□□□ -2
CREB3O43889 AP005660.1-201ENST00000522972 293 ntBASIC2.58□□□□□ -2
CREB3O43889 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.58□□□□□ -2
CREB3O43889 AC010525.2-201ENST00000590920 195 ntBASIC2.58□□□□□ -2
CREB3O43889 BNIP3P25-201ENST00000596023 559 ntBASIC2.58□□□□□ -2
CREB3O43889 AC091932.3-201ENST00000624223 323 ntBASIC2.58□□□□□ -2
CREB3O43889 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CREB3O43889 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
CREB3O43889 RNU6-1317P-201ENST00000364582 104 ntBASIC2.57□□□□□ -2
CREB3O43889 RNU6-780P-201ENST00000391030 104 ntBASIC2.57□□□□□ -2
CREB3O43889 MIR450B-201ENST00000401182 78 ntBASIC2.57□□□□□ -2
CREB3O43889 RNU6-908P-201ENST00000410160 94 ntBASIC2.57□□□□□ -2
CREB3O43889 RNA5SP508-201ENST00000411327 119 ntBASIC2.57□□□□□ -2
CREB3O43889 OOSP1P1-201ENST00000423265 274 ntBASIC2.57□□□□□ -2
CREB3O43889 MTND3P9-201ENST00000429526 346 ntBASIC2.57□□□□□ -2
CREB3O43889 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.57□□□□□ -2
CREB3O43889 NDUFA5P4-201ENST00000436704 385 ntBASIC2.57□□□□□ -2
CREB3O43889 HMGN2P18-201ENST00000450680 270 ntBASIC2.57□□□□□ -2
CREB3O43889 AC021146.2-201ENST00000504736 556 ntBASIC2.57□□□□□ -2
CREB3O43889 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
CREB3O43889 MRPS17P9-201ENST00000511924 393 ntBASIC2.57□□□□□ -2
CREB3O43889 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
CREB3O43889 RNU6-1332P-201ENST00000516666 104 ntBASIC2.57□□□□□ -2
CREB3O43889 AC109635.3-201ENST00000529536 185 ntBASIC2.57□□□□□ -2
CREB3O43889 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.57□□□□□ -2
CREB3O43889 MIR4299-201ENST00000577899 72 ntBASIC2.57□□□□□ -2
CREB3O43889 MIR3945-201ENST00000581853 98 ntBASIC2.57□□□□□ -2
CREB3O43889 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.57□□□□□ -2
CREB3O43889 AC012557.2-201ENST00000605919 418 ntBASIC2.57□□□□□ -2
CREB3O43889 AC025754.2-201ENST00000606491 432 ntBASIC2.57□□□□□ -2
CREB3O43889 AC005296.1-201ENST00000616145 209 ntBASIC2.57□□□□□ -2
CREB3O43889 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.57□□□□□ -2
CREB3O43889 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
CREB3O43889 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
CREB3O43889 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CREB3O43889 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
CREB3O43889 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CREB3O43889 Y_RNA.167-201ENST00000363735 109 ntBASIC2.56□□□□□ -2
CREB3O43889 SNORD113-7-201ENST00000363762 77 ntBASIC2.56□□□□□ -2
CREB3O43889 RNY3P3-201ENST00000363816 102 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms