Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MTND4P1-201ENST00000457501 1466 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.59□□□□□ -1.99
ITM2AO43736 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
ITM2AO43736 Y_RNA.40-201ENST00000362645 93 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 SNORA38.1-201ENST00000364172 131 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 SNORA36A-201ENST00000384221 132 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AL138885.1-201ENST00000405921 675 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 RNU6-1245P-201ENST00000411130 106 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.59□□□□□ -1.99
ITM2AO43736 MTCO3P29-201ENST00000432119 779 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AC124916.1-201ENST00000444020 547 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.59□□□□□ -1.99
ITM2AO43736 RPL39P29-201ENST00000447779 157 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ITM2AO43736 BX510359.1-201ENST00000456973 237 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AF186996.7-201ENST00000492781 209 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 GZMAP1-201ENST00000503054 631 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 RAC1P5-201ENST00000512182 576 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 RNU6-264P-201ENST00000517134 104 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.59□□□□□ -1.99
ITM2AO43736 HSPE1P20-201ENST00000538133 289 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 DNAJC8P1-201ENST00000554535 372 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 RPS15AP11-201ENST00000594193 385 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.59□□□□□ -1.99
ITM2AO43736 AC138305.3-201ENST00000624988 240 ntBASIC2.59□□□□□ -1.99
ITM2AO43736 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.59□□□□□ -2
ITM2AO43736 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ITM2AO43736 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.58□□□□□ -2
ITM2AO43736 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ITM2AO43736 Y_RNA.80-201ENST00000362996 102 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU1-105P-201ENST00000363470 161 ntBASIC2.58□□□□□ -2
ITM2AO43736 Y_RNA.162-201ENST00000363683 102 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNY3P11-201ENST00000364153 102 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNA5SP72-201ENST00000364442 117 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU6-1141P-201ENST00000364520 107 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU6-1032P-201ENST00000384100 107 ntBASIC2.58□□□□□ -2
ITM2AO43736 Y_RNA.485-201ENST00000384395 102 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU6-1222P-201ENST00000384615 107 ntBASIC2.58□□□□□ -2
ITM2AO43736 Y_RNA.577-201ENST00000384794 101 ntBASIC2.58□□□□□ -2
ITM2AO43736 MIR767-201ENST00000390228 109 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL356057.3-201ENST00000402607 340 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL138827.1-201ENST00000402666 306 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU6-1156P-201ENST00000410365 100 ntBASIC2.58□□□□□ -2
ITM2AO43736 EEF1A1P41-201ENST00000414667 207 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL358453.1-201ENST00000422522 250 ntBASIC2.58□□□□□ -2
ITM2AO43736 YME1L1P1-201ENST00000429435 297 ntBASIC2.58□□□□□ -2
ITM2AO43736 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.58□□□□□ -2
ITM2AO43736 AL513124.1-201ENST00000450410 614 ntBASIC2.58□□□□□ -2
ITM2AO43736 SNRPGP7-201ENST00000469016 106 ntBASIC2.58□□□□□ -2
ITM2AO43736 AC107626.1-201ENST00000471084 183 ntBASIC2.58□□□□□ -2
ITM2AO43736 RPL23AP75-201ENST00000491601 451 ntBASIC2.58□□□□□ -2
ITM2AO43736 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.58□□□□□ -2
ITM2AO43736 RNU4-77P-201ENST00000516692 156 ntBASIC2.58□□□□□ -2
ITM2AO43736 SNORD116.3-201ENST00000517176 78 ntBASIC2.58□□□□□ -2
ITM2AO43736 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
ITM2AO43736 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.58□□□□□ -2
ITM2AO43736 AC092447.9-201ENST00000603395 144 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL355877.2-201ENST00000603670 358 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL360085.1-201ENST00000604713 532 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL356157.2-201ENST00000605122 111 ntBASIC2.58□□□□□ -2
ITM2AO43736 SNORD58B-201ENST00000607313 66 ntBASIC2.58□□□□□ -2
ITM2AO43736 RNU6-91P-201ENST00000607774 107 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.58□□□□□ -2
ITM2AO43736 AC006157.1-201ENST00000611750 366 ntBASIC2.58□□□□□ -2
ITM2AO43736 MIR1244-1-201ENST00000612829 85 ntBASIC2.58□□□□□ -2
ITM2AO43736 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.58□□□□□ -2
ITM2AO43736 AC087588.2-201ENST00000617667 426 ntBASIC2.58□□□□□ -2
ITM2AO43736 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.58□□□□□ -2
ITM2AO43736 MIR1244-3-201ENST00000635744 85 ntBASIC2.58□□□□□ -2
ITM2AO43736 MIR1244-2-201ENST00000636449 85 ntBASIC2.58□□□□□ -2
ITM2AO43736 MIR1244-4-202ENST00000636813 85 ntBASIC2.58□□□□□ -2
ITM2AO43736 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ITM2AO43736 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
ITM2AO43736 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
ITM2AO43736 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
ITM2AO43736 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ITM2AO43736 RNU5B-2P-201ENST00000363036 113 ntBASIC2.57□□□□□ -2
ITM2AO43736 RNU6-1286P-201ENST00000383871 107 ntBASIC2.57□□□□□ -2
ITM2AO43736 Y_RNA.428-201ENST00000384078 102 ntBASIC2.57□□□□□ -2
ITM2AO43736 SNORA29-201ENST00000384183 140 ntBASIC2.57□□□□□ -2
ITM2AO43736 RNU6-738P-201ENST00000384531 106 ntBASIC2.57□□□□□ -2
ITM2AO43736 MIR606-201ENST00000384851 96 ntBASIC2.57□□□□□ -2
ITM2AO43736 MIR147B-201ENST00000390185 80 ntBASIC2.57□□□□□ -2
ITM2AO43736 RN7SKP61-201ENST00000410642 295 ntBASIC2.57□□□□□ -2
ITM2AO43736 MTND2P23-201ENST00000422990 651 ntBASIC2.57□□□□□ -2
ITM2AO43736 FTH1P2-201ENST00000466086 412 ntBASIC2.57□□□□□ -2
ITM2AO43736 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.57□□□□□ -2
ITM2AO43736 RPL30P10-201ENST00000488148 337 ntBASIC2.57□□□□□ -2
ITM2AO43736 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
ITM2AO43736 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.57□□□□□ -2
ITM2AO43736 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
ITM2AO43736 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
ITM2AO43736 RN7SKP57-201ENST00000517248 293 ntBASIC2.57□□□□□ -2
ITM2AO43736 RNU6-988P-201ENST00000519081 107 ntBASIC2.57□□□□□ -2
ITM2AO43736 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.57□□□□□ -2
ITM2AO43736 HSPE1P4-201ENST00000550617 308 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms