Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RPS29P29-201ENST00000456396 171 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.43□□□□□ -2.18
CHMP2AO43633 MTND3P7-201ENST00000474435 343 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 RPL36AP21-201ENST00000490372 323 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AC010486.2-201ENST00000505572 483 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 TRMT112P2-201ENST00000512910 132 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 MTCO3P28-201ENST00000513351 515 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 Y_RNA.717-201ENST00000517106 92 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AC084364.2-201ENST00000546924 395 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 MIR5583-1-201ENST00000580941 59 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 MIR4775-201ENST00000581168 75 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 RMST_4.1-201ENST00000616886 107 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AC130454.1-201ENST00000622948 401 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AC007792.1-201ENST00000623023 402 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AP000560.1-201ENST00000624150 1937 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CHMP2AO43633 RNU6-1287P-201ENST00000362914 107 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 SNORD114-6-201ENST00000364393 72 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 RNU5E-7P-201ENST00000365290 117 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 RNU6-692P-201ENST00000384496 107 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 RNU6-1060P-201ENST00000384664 107 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 RAP1BP3-201ENST00000407180 549 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 RNU2-9P-201ENST00000410194 145 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AL365203.2-201ENST00000423444 196 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 MTCO3P46-201ENST00000425787 232 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AL365400.1-201ENST00000431854 640 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AL358934.1-201ENST00000432346 324 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AC092473.1-201ENST00000441098 221 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AL357134.1-201ENST00000445848 426 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AL035666.1-201ENST00000446195 348 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.42□□□□□ -2.18
CHMP2AO43633 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.42□□□□□ -2.18
CHMP2AO43633 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CHMP2AO43633 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.42□□□□□ -2.18
CHMP2AO43633 MIR3169-201ENST00000578032 83 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.42□□□□□ -2.18
CHMP2AO43633 AC091931.1-201ENST00000623488 728 ntBASIC1.42□□□□□ -2.18
CHMP2AO43633 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHMP2AO43633 Y_RNA.67-201ENST00000362870 100 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 RNU6-527P-201ENST00000363425 104 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 Y_RNA.164-201ENST00000363709 102 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 Y_RNA.324-201ENST00000365165 102 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.41□□□□□ -2.18
CHMP2AO43633 BTF3L4P1-201ENST00000413813 468 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.41□□□□□ -2.18
CHMP2AO43633 MTND4P20-201ENST00000424125 869 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 RPS6P15-201ENST00000431996 751 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 GPR143P-201ENST00000434155 205 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP2AO43633 MTCO2P6-201ENST00000463134 685 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 RNU5F-2P-201ENST00000516066 82 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.41□□□□□ -2.18
CHMP2AO43633 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP2AO43633 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP2AO43633 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.41□□□□□ -2.18
CHMP2AO43633 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 MIR5692A1-201ENST00000580523 69 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 AC120349.3-201ENST00000624377 529 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 Z69720.2-201ENST00000624755 279 ntBASIC1.41□□□□□ -2.18
CHMP2AO43633 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHMP2AO43633 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.4□□□□□ -2.19
CHMP2AO43633 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHMP2AO43633 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 Y_RNA.201-201ENST00000364052 96 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 Y_RNA.381-201ENST00000365666 102 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 RNU6-160P-201ENST00000384591 107 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 RNU6-606P-201ENST00000384721 111 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 RNY3P10-201ENST00000384764 102 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHMP2AO43633 AC243964.1-201ENST00000441814 261 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 RPS27AP8-201ENST00000452665 445 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 AL033528.1-201ENST00000453780 140 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 RPL30P1-201ENST00000488676 339 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 AC074344.1-201ENST00000512823 224 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 SNORD27.1-201ENST00000516319 72 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 RNU6-410P-201ENST00000517006 107 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.4□□□□□ -2.19
CHMP2AO43633 AP003034.1-201ENST00000534621 422 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.4□□□□□ -2.19
CHMP2AO43633 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.4□□□□□ -2.19
CHMP2AO43633 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.4□□□□□ -2.19
CHMP2AO43633 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 AP001506.1-201ENST00000615444 211 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHMP2AO43633 U6.114-201ENST00000636407 96 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 U4.7-201ENST00000638126 106 ntBASIC1.4□□□□□ -2.19
CHMP2AO43633 Y_RNA.4-201ENST00000362333 112 ntBASIC1.39□□□□□ -2.19
CHMP2AO43633 RNU4-15P-201ENST00000362613 141 ntBASIC1.39□□□□□ -2.19
CHMP2AO43633 RNU6-105P-201ENST00000363909 104 ntBASIC1.39□□□□□ -2.19
CHMP2AO43633 SNORA16.2-201ENST00000390991 127 ntBASIC1.39□□□□□ -2.19
CHMP2AO43633 RNU2-8P-201ENST00000410727 190 ntBASIC1.39□□□□□ -2.19
CHMP2AO43633 RNU6-293P-201ENST00000411259 106 ntBASIC1.39□□□□□ -2.19
CHMP2AO43633 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.39□□□□□ -2.19
CHMP2AO43633 RPL30P13-201ENST00000418873 348 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms