Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC104564.1-201ENST00000493028 407 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.12□□□□□ -1.91
PROM1O43490 Y_RNA.668-201ENST00000516233 93 ntBASIC3.12□□□□□ -1.91
PROM1O43490 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
PROM1O43490 MRPS36P4-201ENST00000534436 298 ntBASIC3.12□□□□□ -1.91
PROM1O43490 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.12□□□□□ -1.91
PROM1O43490 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.12□□□□□ -1.91
PROM1O43490 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.12□□□□□ -1.91
PROM1O43490 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AC107871.2-201ENST00000612894 502 ntBASIC3.12□□□□□ -1.91
PROM1O43490 MIR6134-201ENST00000617606 109 ntBASIC3.12□□□□□ -1.91
PROM1O43490 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PROM1O43490 ADAM3A-203ENST00000461344 2157 ntBASIC3.12□□□□□ -1.91
PROM1O43490 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PROM1O43490 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
PROM1O43490 Z75746.1-201ENST00000440243 2080 ntBASIC3.12□□□□□ -1.91
PROM1O43490 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
PROM1O43490 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PROM1O43490 Y_RNA.19-201ENST00000362462 99 ntBASIC3.11□□□□□ -1.91
PROM1O43490 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
PROM1O43490 Y_RNA.64-201ENST00000362845 102 ntBASIC3.11□□□□□ -1.91
PROM1O43490 U3.13-201ENST00000364804 214 ntBASIC3.11□□□□□ -1.91
PROM1O43490 RNU6-806P-201ENST00000365147 105 ntBASIC3.11□□□□□ -1.91
PROM1O43490 U3.19-201ENST00000390893 196 ntBASIC3.11□□□□□ -1.91
PROM1O43490 RNU6-907P-201ENST00000390924 102 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.11□□□□□ -1.91
PROM1O43490 Z82188.1-201ENST00000436709 154 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC243964.1-201ENST00000441814 261 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.11□□□□□ -1.91
PROM1O43490 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.11□□□□□ -1.91
PROM1O43490 snoU13.28-201ENST00000459235 104 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.11□□□□□ -1.91
PROM1O43490 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.11□□□□□ -1.91
PROM1O43490 RNU6-581P-201ENST00000516214 105 ntBASIC3.11□□□□□ -1.91
PROM1O43490 RNU6-897P-201ENST00000517135 105 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
PROM1O43490 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AL162713.1-201ENST00000604480 262 ntBASIC3.11□□□□□ -1.91
PROM1O43490 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC024581.2-201ENST00000619986 252 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.11□□□□□ -1.91
PROM1O43490 AC130454.1-201ENST00000622948 401 ntBASIC3.11□□□□□ -1.91
PROM1O43490 AC073476.4-201ENST00000628409 72 ntBASIC3.11□□□□□ -1.91
PROM1O43490 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.11□□□□□ -1.91
PROM1O43490 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.11□□□□□ -1.91
PROM1O43490 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PROM1O43490 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.1□□□□□ -1.91
PROM1O43490 OR56A5-201ENST00000340110 738 ntBASIC3.1□□□□□ -1.91
PROM1O43490 Y_RNA.26-201ENST00000362539 101 ntBASIC3.1□□□□□ -1.91
PROM1O43490 RNU1-76P-201ENST00000362903 159 ntBASIC3.1□□□□□ -1.91
PROM1O43490 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
PROM1O43490 RNU6-270P-201ENST00000364131 105 ntBASIC3.1□□□□□ -1.91
PROM1O43490 Y_RNA.276-201ENST00000364732 109 ntBASIC3.1□□□□□ -1.91
PROM1O43490 RNU4-9P-201ENST00000364951 139 ntBASIC3.1□□□□□ -1.91
PROM1O43490 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.1□□□□□ -1.91
PROM1O43490 FTH1P15-201ENST00000406984 280 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.1□□□□□ -1.91
PROM1O43490 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.1□□□□□ -1.91
PROM1O43490 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AL714022.1-201ENST00000439897 151 ntBASIC3.1□□□□□ -1.91
PROM1O43490 RNU7-23P-201ENST00000459465 62 ntBASIC3.1□□□□□ -1.91
PROM1O43490 MRPL42P6-201ENST00000486397 371 ntBASIC3.1□□□□□ -1.91
PROM1O43490 RNU6-794P-201ENST00000517261 64 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AC034114.1-201ENST00000520293 285 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.1□□□□□ -1.91
PROM1O43490 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PROM1O43490 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
PROM1O43490 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AC073657.2-201ENST00000605661 303 ntBASIC3.1□□□□□ -1.91
PROM1O43490 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
PROM1O43490 AP000560.1-201ENST00000624150 1937 ntBASIC3.1□□□□□ -1.91
PROM1O43490 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PROM1O43490 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
PROM1O43490 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
PROM1O43490 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PROM1O43490 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PROM1O43490 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.09□□□□□ -1.91
PROM1O43490 RNU6-770P-201ENST00000363929 105 ntBASIC3.09□□□□□ -1.91
PROM1O43490 RNA5SP229-201ENST00000410809 99 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AL358453.1-201ENST00000422522 250 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AL365496.1-201ENST00000426885 215 ntBASIC3.09□□□□□ -1.91
PROM1O43490 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.09□□□□□ -1.91
PROM1O43490 snoU13.30-201ENST00000458951 104 ntBASIC3.09□□□□□ -1.91
PROM1O43490 UBE2DNL-203ENST00000474922 222 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AC091874.1-201ENST00000511402 339 ntBASIC3.09□□□□□ -1.91
PROM1O43490 RNU6-1143P-201ENST00000516125 104 ntBASIC3.09□□□□□ -1.91
PROM1O43490 RNU6-570P-201ENST00000517051 105 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AC109329.1-201ENST00000518744 317 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.09□□□□□ -1.91
PROM1O43490 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.09□□□□□ -1.91
PROM1O43490 AC019159.1-201ENST00000605094 187 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.09□□□□□ -1.91
PROM1O43490 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.09□□□□□ -1.91
PROM1O43490 AC243829.7-201ENST00000633081 225 ntBASIC3.09□□□□□ -1.91
PROM1O43490 U6.104-201ENST00000637979 90 ntBASIC3.09□□□□□ -1.91
PROM1O43490 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms