Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX4O43316 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX4O43316 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX4O43316 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX4O43316 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX4O43316 RNU4-36P-201ENST00000364294 144 ntBASIC3.38□□□□□ -1.87
PAX4O43316 SNORA51.8-201ENST00000384234 132 ntBASIC3.38□□□□□ -1.87
PAX4O43316 Y_RNA.486-201ENST00000384398 107 ntBASIC3.38□□□□□ -1.87
PAX4O43316 RNY1P4-201ENST00000384595 115 ntBASIC3.38□□□□□ -1.87
PAX4O43316 FTH1P15-201ENST00000406984 280 ntBASIC3.38□□□□□ -1.87
PAX4O43316 RNU4-37P-201ENST00000410214 84 ntBASIC3.38□□□□□ -1.87
PAX4O43316 Y_RNA.601-201ENST00000410500 113 ntBASIC3.38□□□□□ -1.87
PAX4O43316 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX4O43316 AC019205.3-201ENST00000424573 156 ntBASIC3.38□□□□□ -1.87
PAX4O43316 RPS27P18-201ENST00000431701 247 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX4O43316 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX4O43316 RN7SL807P-201ENST00000470923 297 ntBASIC3.38□□□□□ -1.87
PAX4O43316 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AC090525.1-201ENST00000479116 478 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AC093259.1-201ENST00000509755 300 ntBASIC3.38□□□□□ -1.87
PAX4O43316 Y_RNA.659-201ENST00000515994 113 ntBASIC3.38□□□□□ -1.87
PAX4O43316 SCARNA15-202ENST00000516881 127 ntBASIC3.38□□□□□ -1.87
PAX4O43316 SNORA31.23-201ENST00000517219 133 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX4O43316 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX4O43316 MIR4777-201ENST00000583710 86 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AC022726.1-201ENST00000587475 207 ntBASIC3.38□□□□□ -1.87
PAX4O43316 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
PAX4O43316 AL022401.1-201ENST00000619498 108 ntBASIC3.38□□□□□ -1.87
PAX4O43316 MIR548BB-201ENST00000626714 66 ntBASIC3.38□□□□□ -1.87
PAX4O43316 MIR376A2-201ENST00000636782 80 ntBASIC3.38□□□□□ -1.87
PAX4O43316 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PAX4O43316 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX4O43316 ZNF137P-201ENST00000456718 1920 ntBASIC3.38□□□□□ -1.87
PAX4O43316 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX4O43316 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX4O43316 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PAX4O43316 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PAX4O43316 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX4O43316 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX4O43316 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
PAX4O43316 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PAX4O43316 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 RNU6-674P-201ENST00000363831 107 ntBASIC3.37□□□□□ -1.87
PAX4O43316 RNU6-1279P-201ENST00000383917 103 ntBASIC3.37□□□□□ -1.87
PAX4O43316 RNU6-616P-201ENST00000384353 107 ntBASIC3.37□□□□□ -1.87
PAX4O43316 RNU6-816P-201ENST00000390914 107 ntBASIC3.37□□□□□ -1.87
PAX4O43316 RNU6-1268P-201ENST00000391214 107 ntBASIC3.37□□□□□ -1.87
PAX4O43316 RNU6-1239P-201ENST00000391310 107 ntBASIC3.37□□□□□ -1.87
PAX4O43316 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 AL139281.1-201ENST00000422120 335 ntBASIC3.37□□□□□ -1.87
PAX4O43316 AC078809.1-201ENST00000427601 140 ntBASIC3.37□□□□□ -1.87
PAX4O43316 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 NDUFS5P3-201ENST00000450668 321 ntBASIC3.37□□□□□ -1.87
PAX4O43316 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.37□□□□□ -1.87
PAX4O43316 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 MIR3667-201ENST00000581025 74 ntBASIC3.37□□□□□ -1.87
PAX4O43316 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
PAX4O43316 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 SALL4P2-201ENST00000423288 2910 ntBASIC3.37□□□□□ -1.87
PAX4O43316 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.37□□□□□ -1.87
PAX4O43316 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX4O43316 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 SDAD1P1-202ENST00000524156 2051 ntBASIC3.37□□□□□ -1.87
PAX4O43316 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PAX4O43316 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.37□□□□□ -1.87
PAX4O43316 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.36□□□□□ -1.87
PAX4O43316 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PAX4O43316 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PAX4O43316 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PAX4O43316 RNU6-1323P-201ENST00000384025 107 ntBASIC3.36□□□□□ -1.87
PAX4O43316 MIR208B-201ENST00000401172 77 ntBASIC3.36□□□□□ -1.87
PAX4O43316 RNU2-68P-201ENST00000410878 191 ntBASIC3.36□□□□□ -1.87
PAX4O43316 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
PAX4O43316 AL356867.1-201ENST00000429623 299 ntBASIC3.36□□□□□ -1.87
PAX4O43316 RPL12P3-201ENST00000440080 396 ntBASIC3.36□□□□□ -1.87
PAX4O43316 RNU6-113P-201ENST00000516653 101 ntBASIC3.36□□□□□ -1.87
PAX4O43316 RNU6-63P-201ENST00000516690 95 ntBASIC3.36□□□□□ -1.87
PAX4O43316 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.36□□□□□ -1.87
PAX4O43316 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.36□□□□□ -1.87
PAX4O43316 AL929325.1-201ENST00000603096 117 ntBASIC3.36□□□□□ -1.87
PAX4O43316 uc_338.4-201ENST00000616635 176 ntBASIC3.36□□□□□ -1.87
PAX4O43316 AC068205.3-201ENST00000636385 468 ntBASIC3.36□□□□□ -1.87
PAX4O43316 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PAX4O43316 MARK2P15-201ENST00000432204 2186 ntBASIC3.36□□□□□ -1.87
PAX4O43316 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
PAX4O43316 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.36□□□□□ -1.87
PAX4O43316 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PAX4O43316 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PAX4O43316 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PAX4O43316 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PAX4O43316 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms