Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MIR521-1-201ENST00000384902 87 ntBASIC2.35□□□□□ -2.03
TO15178 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
TO15178 AC003685.2-201ENST00000422795 395 ntBASIC2.35□□□□□ -2.03
TO15178 MTND3P9-201ENST00000429526 346 ntBASIC2.35□□□□□ -2.03
TO15178 MTND1P17-201ENST00000448961 204 ntBASIC2.35□□□□□ -2.03
TO15178 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
TO15178 RPS29P27-201ENST00000463711 170 ntBASIC2.35□□□□□ -2.03
TO15178 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
TO15178 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.35□□□□□ -2.03
TO15178 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.35□□□□□ -2.03
TO15178 AP005639.2-201ENST00000527592 928 ntBASIC2.35□□□□□ -2.03
TO15178 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.35□□□□□ -2.03
TO15178 AC007375.1-201ENST00000554513 578 ntBASIC2.35□□□□□ -2.03
TO15178 MIR3136-201ENST00000583498 78 ntBASIC2.35□□□□□ -2.03
TO15178 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.35□□□□□ -2.03
TO15178 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TO15178 AC019193.3-201ENST00000609144 554 ntBASIC2.35□□□□□ -2.03
TO15178 AC008121.3-201ENST00000618726 433 ntBASIC2.35□□□□□ -2.03
TO15178 AC009541.1-201ENST00000438279 2662 ntBASIC2.35□□□□□ -2.03
TO15178 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.35□□□□□ -2.03
TO15178 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TO15178 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.34□□□□□ -2.03
TO15178 Y_RNA.88-201ENST00000363029 99 ntBASIC2.34□□□□□ -2.03
TO15178 RNU4-56P-201ENST00000364700 142 ntBASIC2.34□□□□□ -2.03
TO15178 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TO15178 RNU6-142P-201ENST00000384019 107 ntBASIC2.34□□□□□ -2.03
TO15178 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TO15178 RNA5SP210-201ENST00000391034 120 ntBASIC2.34□□□□□ -2.03
TO15178 RN7SKP158-201ENST00000410453 326 ntBASIC2.34□□□□□ -2.03
TO15178 DAP3P1-201ENST00000441522 278 ntBASIC2.34□□□□□ -2.03
TO15178 USP9YP8-201ENST00000441913 500 ntBASIC2.34□□□□□ -2.03
TO15178 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.34□□□□□ -2.03
TO15178 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
TO15178 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.34□□□□□ -2.03
TO15178 SRIP1-201ENST00000489235 288 ntBASIC2.34□□□□□ -2.03
TO15178 AC104564.1-201ENST00000493028 407 ntBASIC2.34□□□□□ -2.03
TO15178 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.34□□□□□ -2.03
TO15178 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.34□□□□□ -2.03
TO15178 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.34□□□□□ -2.03
TO15178 RNU5F-2P-201ENST00000516066 82 ntBASIC2.34□□□□□ -2.03
TO15178 RNU1-54P-201ENST00000517181 120 ntBASIC2.34□□□□□ -2.03
TO15178 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.34□□□□□ -2.03
TO15178 AC093249.1-201ENST00000567049 203 ntBASIC2.34□□□□□ -2.03
TO15178 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
TO15178 AC078795.3-201ENST00000602913 472 ntBASIC2.34□□□□□ -2.03
TO15178 AL713866.2-201ENST00000603579 219 ntBASIC2.34□□□□□ -2.03
TO15178 AL138963.2-201ENST00000605137 226 ntBASIC2.34□□□□□ -2.03
TO15178 AC124303.1-201ENST00000605703 360 ntBASIC2.34□□□□□ -2.03
TO15178 uc_338.5-201ENST00000611839 155 ntBASIC2.34□□□□□ -2.03
TO15178 AL161423.1-201ENST00000613700 262 ntBASIC2.34□□□□□ -2.03
TO15178 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
TO15178 AC012640.5-201ENST00000623897 319 ntBASIC2.34□□□□□ -2.03
TO15178 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
TO15178 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TO15178 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TO15178 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
TO15178 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TO15178 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TO15178 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TO15178 SNORA72.1-201ENST00000363485 129 ntBASIC2.33□□□□□ -2.04
TO15178 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
TO15178 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
TO15178 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
TO15178 MIR517A-201ENST00000385001 87 ntBASIC2.33□□□□□ -2.04
TO15178 AC074085.1-201ENST00000413598 418 ntBASIC2.33□□□□□ -2.04
TO15178 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.33□□□□□ -2.04
TO15178 EIF1AXP1-201ENST00000419267 435 ntBASIC2.33□□□□□ -2.04
TO15178 NCOR1P3-201ENST00000420479 303 ntBASIC2.33□□□□□ -2.04
TO15178 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.33□□□□□ -2.04
TO15178 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.33□□□□□ -2.04
TO15178 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
TO15178 AL353572.1-201ENST00000442490 417 ntBASIC2.33□□□□□ -2.04
TO15178 HMGN1P12-201ENST00000499125 195 ntBASIC2.33□□□□□ -2.04
TO15178 HMGB1P35-201ENST00000503360 598 ntBASIC2.33□□□□□ -2.04
TO15178 RNU6-586P-201ENST00000517265 104 ntBASIC2.33□□□□□ -2.04
TO15178 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.33□□□□□ -2.04
TO15178 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.33□□□□□ -2.04
TO15178 MIR548S-201ENST00000581352 82 ntBASIC2.33□□□□□ -2.04
TO15178 AC005730.3-201ENST00000583067 366 ntBASIC2.33□□□□□ -2.04
TO15178 POLR3GP2-201ENST00000588366 668 ntBASIC2.33□□□□□ -2.04
TO15178 AC009233.1-201ENST00000616477 371 ntBASIC2.33□□□□□ -2.04
TO15178 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
TO15178 AC005858.4-201ENST00000623191 700 ntBASIC2.33□□□□□ -2.04
TO15178 AL133216.2-202ENST00000634512 349 ntBASIC2.33□□□□□ -2.04
TO15178 SNORD98-201ENST00000636377 67 ntBASIC2.33□□□□□ -2.04
TO15178 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.33□□□□□ -2.04
TO15178 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TO15178 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
TO15178 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
TO15178 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
TO15178 Y_RNA.504-201ENST00000384481 104 ntBASIC2.32□□□□□ -2.04
TO15178 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
TO15178 MIR29B2-201ENST00000385055 81 ntBASIC2.32□□□□□ -2.04
TO15178 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TO15178 MIR548K-201ENST00000408406 116 ntBASIC2.32□□□□□ -2.04
TO15178 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.32□□□□□ -2.04
TO15178 AL590135.1-201ENST00000422215 156 ntBASIC2.32□□□□□ -2.04
TO15178 AL590556.1-201ENST00000423231 483 ntBASIC2.32□□□□□ -2.04
TO15178 AC019205.3-201ENST00000424573 156 ntBASIC2.32□□□□□ -2.04
TO15178 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms