Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SNORA25.11-201ENST00000515935 105 ntBASIC3.08□□□□□ -1.92
APAF1O14727 Y_RNA.702-201ENST00000516843 96 ntBASIC3.08□□□□□ -1.92
APAF1O14727 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.08□□□□□ -1.92
APAF1O14727 AC007375.1-201ENST00000554513 578 ntBASIC3.08□□□□□ -1.92
APAF1O14727 AC021231.3-201ENST00000558497 370 ntBASIC3.08□□□□□ -1.92
APAF1O14727 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.08□□□□□ -1.92
APAF1O14727 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.08□□□□□ -1.92
APAF1O14727 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
APAF1O14727 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APAF1O14727 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APAF1O14727 Y_RNA.151-201ENST00000363566 112 ntBASIC3.07□□□□□ -1.92
APAF1O14727 RNY3P14-201ENST00000384309 102 ntBASIC3.07□□□□□ -1.92
APAF1O14727 MIR521-1-201ENST00000384902 87 ntBASIC3.07□□□□□ -1.92
APAF1O14727 MIR29B2-201ENST00000385055 81 ntBASIC3.07□□□□□ -1.92
APAF1O14727 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
APAF1O14727 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.07□□□□□ -1.92
APAF1O14727 PDCL2P1-201ENST00000419302 352 ntBASIC3.07□□□□□ -1.92
APAF1O14727 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.07□□□□□ -1.92
APAF1O14727 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.07□□□□□ -1.92
APAF1O14727 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.07□□□□□ -1.92
APAF1O14727 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.07□□□□□ -1.92
APAF1O14727 AC116337.1-201ENST00000509680 687 ntBASIC3.07□□□□□ -1.92
APAF1O14727 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.07□□□□□ -1.92
APAF1O14727 MIR5571-201ENST00000577998 113 ntBASIC3.07□□□□□ -1.92
APAF1O14727 AC090616.3-201ENST00000582184 217 ntBASIC3.07□□□□□ -1.92
APAF1O14727 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APAF1O14727 AL359198.2-201ENST00000611836 194 ntBASIC3.07□□□□□ -1.92
APAF1O14727 AC092794.2-201ENST00000620933 563 ntBASIC3.07□□□□□ -1.92
APAF1O14727 IGHVIII-44-202ENST00000636235 289 ntBASIC3.07□□□□□ -1.92
APAF1O14727 AC099654.5-201ENST00000636479 350 ntBASIC3.07□□□□□ -1.92
APAF1O14727 TPTEP1-208ENST00000636884 213 ntBASIC3.07□□□□□ -1.92
APAF1O14727 MAPK10-266ENST00000641066 6555 ntBASIC3.07□□□□□ -1.92
APAF1O14727 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
APAF1O14727 Y_RNA.303-201ENST00000364998 94 ntBASIC3.06□□□□□ -1.92
APAF1O14727 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
APAF1O14727 RNU6-1009P-201ENST00000390996 107 ntBASIC3.06□□□□□ -1.92
APAF1O14727 RN7SKP158-201ENST00000410453 326 ntBASIC3.06□□□□□ -1.92
APAF1O14727 RPL37P10-201ENST00000412884 288 ntBASIC3.06□□□□□ -1.92
APAF1O14727 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.06□□□□□ -1.92
APAF1O14727 AL590556.1-201ENST00000423231 483 ntBASIC3.06□□□□□ -1.92
APAF1O14727 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.06□□□□□ -1.92
APAF1O14727 MTND3P9-201ENST00000429526 346 ntBASIC3.06□□□□□ -1.92
APAF1O14727 AC140059.1-201ENST00000489238 361 ntBASIC3.06□□□□□ -1.92
APAF1O14727 CKS1BP2-201ENST00000497342 240 ntBASIC3.06□□□□□ -1.92
APAF1O14727 HMGB1P35-201ENST00000503360 598 ntBASIC3.06□□□□□ -1.92
APAF1O14727 RPPH1-2P-201ENST00000516688 293 ntBASIC3.06□□□□□ -1.92
APAF1O14727 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.06□□□□□ -1.92
APAF1O14727 HSPE1P20-201ENST00000538133 289 ntBASIC3.06□□□□□ -1.92
APAF1O14727 AC023824.2-201ENST00000566185 400 ntBASIC3.06□□□□□ -1.92
APAF1O14727 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.06□□□□□ -1.92
APAF1O14727 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.06□□□□□ -1.92
APAF1O14727 AL137847.3-201ENST00000611521 109 ntBASIC3.06□□□□□ -1.92
APAF1O14727 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.06□□□□□ -1.92
APAF1O14727 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APAF1O14727 AC135776.4-201ENST00000624300 1904 ntBASIC3.05□□□□□ -1.92
APAF1O14727 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.05□□□□□ -1.92
APAF1O14727 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.05□□□□□ -1.92
APAF1O14727 MTND4P12-201ENST00000498999 1377 ntBASIC3.05□□□□□ -1.92
APAF1O14727 Y_RNA.40-201ENST00000362645 93 ntBASIC3.05□□□□□ -1.92
APAF1O14727 Y_RNA.142-201ENST00000363491 102 ntBASIC3.05□□□□□ -1.92
APAF1O14727 Y_RNA.339-201ENST00000365325 102 ntBASIC3.05□□□□□ -1.92
APAF1O14727 RNU6-784P-201ENST00000384330 106 ntBASIC3.05□□□□□ -1.92
APAF1O14727 Y_RNA.482-201ENST00000384377 111 ntBASIC3.05□□□□□ -1.92
APAF1O14727 AC003685.2-201ENST00000422795 395 ntBASIC3.05□□□□□ -1.92
APAF1O14727 EIF4EP2-201ENST00000422816 654 ntBASIC3.05□□□□□ -1.92
APAF1O14727 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.05□□□□□ -1.92
APAF1O14727 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.05□□□□□ -1.92
APAF1O14727 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.05□□□□□ -1.92
APAF1O14727 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.05□□□□□ -1.92
APAF1O14727 AC103851.1-201ENST00000506833 274 ntBASIC3.05□□□□□ -1.92
APAF1O14727 PTP4A1P4-201ENST00000512479 322 ntBASIC3.05□□□□□ -1.92
APAF1O14727 RNU5F-2P-201ENST00000516066 82 ntBASIC3.05□□□□□ -1.92
APAF1O14727 RNA5SP281-201ENST00000516504 135 ntBASIC3.05□□□□□ -1.92
APAF1O14727 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APAF1O14727 FGF7P1-201ENST00000582820 288 ntBASIC3.05□□□□□ -1.92
APAF1O14727 MIR5007-201ENST00000583098 95 ntBASIC3.05□□□□□ -1.92
APAF1O14727 AC243960.4-201ENST00000600532 288 ntBASIC3.05□□□□□ -1.92
APAF1O14727 AL133216.2-202ENST00000634512 349 ntBASIC3.05□□□□□ -1.92
APAF1O14727 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.05□□□□□ -1.92
APAF1O14727 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APAF1O14727 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APAF1O14727 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.04□□□□□ -1.92
APAF1O14727 U3.13-201ENST00000364804 214 ntBASIC3.04□□□□□ -1.92
APAF1O14727 Y_RNA.500-201ENST00000384466 111 ntBASIC3.04□□□□□ -1.92
APAF1O14727 AL591034.2-201ENST00000402839 359 ntBASIC3.04□□□□□ -1.92
APAF1O14727 MIR548F5-201ENST00000408421 86 ntBASIC3.04□□□□□ -1.92
APAF1O14727 GPM6BP3-201ENST00000442797 145 ntBASIC3.04□□□□□ -1.92
APAF1O14727 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.04□□□□□ -1.92
APAF1O14727 SNRPGP7-201ENST00000469016 106 ntBASIC3.04□□□□□ -1.92
APAF1O14727 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.04□□□□□ -1.92
APAF1O14727 RNU6-1016P-201ENST00000516689 94 ntBASIC3.04□□□□□ -1.92
APAF1O14727 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.04□□□□□ -1.92
APAF1O14727 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.04□□□□□ -1.92
APAF1O14727 IMMP1LP2-201ENST00000552954 492 ntBASIC3.04□□□□□ -1.92
APAF1O14727 MIR6128-201ENST00000615528 109 ntBASIC3.04□□□□□ -1.92
APAF1O14727 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.03□□□□□ -1.92
APAF1O14727 RNU1-72P-201ENST00000362976 153 ntBASIC3.03□□□□□ -1.92
APAF1O14727 Y_RNA.504-201ENST00000384481 104 ntBASIC3.03□□□□□ -1.92
APAF1O14727 MIR95-201ENST00000385072 81 ntBASIC3.03□□□□□ -1.92
APAF1O14727 AL356432.1-201ENST00000405809 419 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms