Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
HMGN4O00479 SNORD116-13-201ENST00000384408 92 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 RNA5SP219-201ENST00000390940 113 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 RNU6-952P-201ENST00000391164 108 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 RNA5SP222-201ENST00000411039 105 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGN4O00479 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGN4O00479 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGN4O00479 AK3P2-201ENST00000507976 429 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGN4O00479 AL136520.1-202ENST00000555494 763 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AL133153.1-201ENST00000557756 303 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AC090888.2-201ENST00000559765 1144 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGN4O00479 EIF1P4-201ENST00000572664 335 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AC007363.1-201ENST00000604736 620 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AL162730.1-201ENST00000605734 292 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AL355816.2-201ENST00000610049 647 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.12□□□□□ -2.43
HMGN4O00479 AL512643.1-201ENST00000635735 524 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 MTND4P5-201ENST00000435821 1374 ntBASIC-0.12□□□□□ -2.43
HMGN4O00479 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.13□□□□□ -2.43
HMGN4O00479 RNU6-438P-201ENST00000365561 103 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
HMGN4O00479 SNORD116-20-201ENST00000384529 92 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
HMGN4O00479 SNORA75.2-201ENST00000391138 150 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 SNORA75.3-201ENST00000391231 150 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
HMGN4O00479 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.13□□□□□ -2.43
HMGN4O00479 RNU4-27P-201ENST00000410889 139 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 AC007000.2-201ENST00000442564 487 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 snoU13.18-201ENST00000459483 104 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
HMGN4O00479 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.13□□□□□ -2.43
HMGN4O00479 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.13□□□□□ -2.43
HMGN4O00479 AC011195.1-201ENST00000578177 177 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 RN7SL793P-201ENST00000583259 296 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 AC073349.3-201ENST00000617616 186 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 AC010975.3-201ENST00000618727 978 ntBASIC-0.13□□□□□ -2.43
HMGN4O00479 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.13□□□□□ -2.43
HMGN4O00479 AC092268.1-201ENST00000342691 405 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 RNY1P8-201ENST00000383970 114 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 MIR140-201ENST00000385282 100 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGN4O00479 C1DP2-201ENST00000418167 426 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AC002486.1-201ENST00000435098 391 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 MTCO3P43-201ENST00000440974 771 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 MTND5P2-201ENST00000442927 1142 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 C1DP4-201ENST00000455429 424 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 RNU7-136P-201ENST00000458819 69 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 HMGN1P12-201ENST00000499125 195 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 MTATP6P9-201ENST00000515039 680 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 SNORA70.12-201ENST00000516084 153 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 SNORA76.2-201ENST00000517095 137 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AC106038.2-201ENST00000520706 568 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGN4O00479 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.14□□□□□ -2.43
HMGN4O00479 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.14□□□□□ -2.43
HMGN4O00479 AC091135.1-201ENST00000585943 307 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AC080078.2-201ENST00000603766 501 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AC097065.2-201ENST00000608159 533 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGN4O00479 OR5AK4P-201ENST00000635912 903 ntBASIC-0.14□□□□□ -2.43
HMGN4O00479 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
HMGN4O00479 RNA5SP264-201ENST00000363115 107 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 RNA5SP62-201ENST00000363457 110 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 SNORA32.2-201ENST00000384049 122 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 RNU6-505P-201ENST00000384427 107 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 SNORA12.2-201ENST00000391040 156 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 RNU6-932P-201ENST00000391108 106 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 SNORA12-201ENST00000391162 147 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 AL591704.1-201ENST00000432574 275 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 AC000111.3-201ENST00000433478 193 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 MTND4P25-201ENST00000441039 533 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 RNU6-947P-201ENST00000516264 106 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 ZNF971P-201ENST00000562068 1249 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 AL136363.2-201ENST00000604173 851 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 AC008147.4-201ENST00000617570 1204 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 7SK.10-201ENST00000621414 298 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.15□□□□□ -2.43
HMGN4O00479 MIR4315-1-201ENST00000636800 73 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 MIR4315-2-201ENST00000640925 73 ntBASIC-0.15□□□□□ -2.43
HMGN4O00479 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
HMGN4O00479 RNU6-72P-201ENST00000384285 79 ntBASIC-0.16□□□□□ -2.44
HMGN4O00479 RNU6-817P-201ENST00000391083 104 ntBASIC-0.16□□□□□ -2.44
HMGN4O00479 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.16□□□□□ -2.44
HMGN4O00479 AL365338.1-201ENST00000422282 858 ntBASIC-0.16□□□□□ -2.44
HMGN4O00479 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.16□□□□□ -2.44
HMGN4O00479 DPRXP1-201ENST00000426312 460 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms