Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU2-23P-201ENST00000410545 195 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXN3O00409 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXN3O00409 RPS29P27-201ENST00000463711 170 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXN3O00409 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXN3O00409 RNA5SP341-201ENST00000516261 117 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 SCARNA16.2-201ENST00000516520 172 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 RNA5SP384-201ENST00000516615 116 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 RNU6-1137P-201ENST00000517073 99 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 AC079598.5-201ENST00000547460 117 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXN3O00409 AL359198.2-201ENST00000611836 194 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 AC133104.2-201ENST00000615272 193 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXN3O00409 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN3O00409 AC002543.1-201ENST00000299783 1954 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXN3O00409 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXN3O00409 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 OR56A5-201ENST00000340110 738 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 Y_RNA.5-201ENST00000362334 102 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 RNU6-1115P-201ENST00000362490 106 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 RNU6-1010P-201ENST00000362757 107 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 RNU6-639P-201ENST00000384074 107 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 RNU1-57P-201ENST00000384491 166 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AL356057.3-201ENST00000402607 340 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN3O00409 BX276092.3-201ENST00000424182 230 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 RPL30P4-201ENST00000429309 333 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC022018.1-201ENST00000430685 241 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN3O00409 AC244670.1-201ENST00000436879 112 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN3O00409 GPM6BP3-201ENST00000442797 145 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 AC097473.1-201ENST00000508142 408 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC092593.1-201ENST00000515413 1815 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 RNU2-53P-201ENST00000516257 147 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXN3O00409 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXN3O00409 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 AC011494.1-201ENST00000596454 237 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC005014.2-201ENST00000607795 599 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
FOXN3O00409 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN3O00409 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
FOXN3O00409 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
FOXN3O00409 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXN3O00409 Y_RNA.28-201ENST00000362554 111 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 SNORD32A-201ENST00000364805 84 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 RNU6-842P-201ENST00000384269 107 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AL590135.1-201ENST00000422215 156 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AC019205.3-201ENST00000424573 156 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 RPS15AP7-201ENST00000439294 405 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXN3O00409 AC016700.2-201ENST00000446011 156 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXN3O00409 RPS29P26-201ENST00000477483 171 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AC015911.1-201ENST00000495111 156 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AC023141.11-201ENST00000508864 202 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 RNU6-988P-201ENST00000519081 107 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXN3O00409 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXN3O00409 AC136443.5-201ENST00000603741 370 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 AC090517.3-201ENST00000625170 141 ntBASIC3.05□□□□□ -1.92
FOXN3O00409 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXN3O00409 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXN3O00409 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXN3O00409 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 RNU6-655P-201ENST00000362858 107 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 RNU6-1141P-201ENST00000364520 107 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 SET-203ENST00000372688 801 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXN3O00409 SNORA36A-201ENST00000384221 132 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 RNU6-574P-201ENST00000384265 107 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 SNORA48.5-201ENST00000391143 135 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXN3O00409 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXN3O00409 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXN3O00409 AC103975.1-201ENST00000482506 483 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AC104564.1-201ENST00000493028 407 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AC021146.2-201ENST00000504736 556 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 SCARNA3-201ENST00000517097 143 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 MRPS36P4-201ENST00000534436 298 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
FOXN3O00409 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXN3O00409 CYP2C61P-201ENST00000604072 290 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AP000942.4-201ENST00000604811 241 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AL670379.2-201ENST00000604983 252 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AL356157.2-201ENST00000605122 111 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 AC006157.1-201ENST00000611750 366 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms