Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL359672.1-201ENST00000442302 409 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 AC245102.2-201ENST00000448956 180 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC188H7C350 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC188H7C350 AC018868.1-201ENST00000491307 315 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC188H7C350 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC188H7C350 SNORA31.16-201ENST00000516773 139 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 RNU6-612P-201ENST00000516909 102 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC188H7C350 AL157687.1-201ENST00000554853 619 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC188H7C350 RNU6-89P-201ENST00000606519 100 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 DUXAP9-208ENST00000622815 614 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC188H7C350 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC188H7C350 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC188H7C350 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC188H7C350 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC188H7C350 Y_RNA.402-201ENST00000383972 102 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 RNU6-1215P-201ENST00000384441 102 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 SNORA46.1-201ENST00000391069 153 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 RN7SKP61-201ENST00000410642 295 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC188H7C350 AC078809.1-201ENST00000427601 140 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 MTND3P9-201ENST00000429526 346 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 CBX3P6-201ENST00000430257 527 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 IPO7P1-201ENST00000442031 636 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC188H7C350 TRBV12-1-201ENST00000479785 344 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC188H7C350 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 NDUFA5P6-201ENST00000542110 379 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 AC018889.1-201ENST00000605372 397 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 AP000654.2-201ENST00000605633 586 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 AC068944.2-201ENST00000610373 403 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 AL590808.1-201ENST00000618696 141 ntBASIC2.18□□□□□ -2.06
CCDC188H7C350 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC188H7C350 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC188H7C350 Y_RNA.3-201ENST00000362331 103 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 SNORD32A-201ENST00000364805 84 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RNU6-142P-201ENST00000384019 107 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 SNORA70B-201ENST00000384210 135 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 MIR450B-201ENST00000401182 78 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC188H7C350 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC188H7C350 AL513124.1-201ENST00000450410 614 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RPL9P9-202ENST00000466501 579 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AC114801.2-201ENST00000503825 781 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RNU1-41P-201ENST00000516161 162 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RNU6-720P-201ENST00000516363 108 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RNU1-48P-201ENST00000516400 162 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 RNU6-567P-201ENST00000516746 107 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC188H7C350 ZNF519P2-201ENST00000557032 169 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AC021231.3-201ENST00000558497 370 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 MIR3923-201ENST00000579521 83 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC188H7C350 AC064807.4-201ENST00000607201 407 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AC064836.2-201ENST00000609491 462 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC188H7C350 MIR1321-201ENST00000637766 79 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 MTND4P23-201ENST00000447723 1363 ntBASIC2.17□□□□□ -2.06
CCDC188H7C350 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC188H7C350 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC188H7C350 Y_RNA.38-201ENST00000362617 102 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 RNU6-1252P-201ENST00000363054 104 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 U3.12-201ENST00000364498 214 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 RNU6-1317P-201ENST00000364582 104 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 RNU6-1329P-201ENST00000365664 107 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC188H7C350 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC188H7C350 AP000275.1-201ENST00000411943 390 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 SRIP2-201ENST00000428470 166 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 IFNA20P-201ENST00000436840 528 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC188H7C350 AC104564.1-201ENST00000493028 407 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC188H7C350 AC091874.1-201ENST00000511402 339 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 RNU6-991P-201ENST00000516168 107 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC188H7C350 AC018630.3-201ENST00000542637 96 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 SNRPGP18-201ENST00000553000 214 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 AC109446.1-201ENST00000566172 220 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
CCDC188H7C350 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC188H7C350 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC188H7C350 RNU4-15P-201ENST00000362613 141 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 RNU6-227P-201ENST00000362865 103 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 RNY3P3-201ENST00000363816 102 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 RNU6-877P-201ENST00000383868 107 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 MIR521-1-201ENST00000384902 87 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 SNORA40.19-201ENST00000390846 128 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 RNU6-908P-201ENST00000410160 94 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms