Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AL391840.1-201ENST00000571144 367 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC005000.2-201ENST00000605468 310 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 RNU6-85P-201ENST00000605989 107 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC005520.5-201ENST00000613926 164 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC136475.10-201ENST00000620253 385 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 WWP1P1-201ENST00000466609 2769 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RNA5SP425-201ENST00000410336 112 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AP000275.1-201ENST00000411943 390 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RPS20P15-201ENST00000412792 311 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RPL21P111-201ENST00000418453 477 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AL358934.1-201ENST00000432346 324 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC016925.1-201ENST00000458303 298 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RPS29P11-201ENST00000496507 171 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 HMGN1P13-201ENST00000505795 138 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RNU6-430P-201ENST00000517078 107 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 MTCO2P4-201ENST00000517968 247 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC104581.2-201ENST00000572227 430 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 MTATP6P3-201ENST00000581686 676 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC040904.1-201ENST00000590850 223 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC009994.1-201ENST00000606889 253 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AC064807.4-201ENST00000607201 407 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 AL136221.1-201ENST00000621449 509 ntBASIC1.26□□□□□ -2.21
SMKR1H3BMG3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.26□□□□□ -2.21
SMKR1H3BMG3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SMKR1H3BMG3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 RNU1-76P-201ENST00000362903 159 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 RNU6-414P-201ENST00000363705 104 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 RNU6-997P-201ENST00000384725 107 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 MIR208B-201ENST00000401172 77 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC012306.1-201ENST00000423267 114 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 CETN4P-201ENST00000432407 469 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AL645568.3-201ENST00000433683 316 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.25□□□□□ -2.21
SMKR1H3BMG3 MTCO2P3-201ENST00000442543 421 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC007395.1-201ENST00000451333 677 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 RPS23P5-201ENST00000495419 428 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 RPL23AP63-201ENST00000498752 471 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC021146.2-201ENST00000504736 556 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 HIF1AP1-201ENST00000553642 175 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC145350.1-201ENST00000567426 208 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC005609.4-201ENST00000625071 447 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 SNORA43.4-201ENST00000629559 138 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AC068205.3-201ENST00000636385 468 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 MIR219B-201ENST00000637023 88 ntBASIC1.25□□□□□ -2.21
SMKR1H3BMG3 AL159152.1-201ENST00000635019 2587 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 SNORA36A-201ENST00000384221 132 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AL049545.1-201ENST00000401856 572 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 MIR1267-201ENST00000408723 78 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 C8orf59P1-201ENST00000429930 303 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 RPS6P15-201ENST00000431996 751 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC104564.1-201ENST00000493028 407 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 RPL38P4-201ENST00000502376 214 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 SNORD60.2-201ENST00000516883 86 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 Y_RNA.717-201ENST00000517106 92 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 DEFB122-202ENST00000569013 197 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC090517.1-201ENST00000569307 266 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 SNORA77B-201ENST00000578179 125 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 MIR5583-1-201ENST00000580941 59 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms