Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU6-965P-201ENST00000516721 96 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 IGLV3-17-201ENST00000519099 244 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC118273.2-201ENST00000532092 465 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC026371.1-201ENST00000551867 419 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 MIR3126-201ENST00000577443 74 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC080078.2-201ENST00000603766 501 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AP000907.4-201ENST00000604143 237 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AL034555.1-201ENST00000604816 211 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 AC022202.1-201ENST00000613515 211 ntBASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
NPIPA3F8WFD2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 RNU4-15P-201ENST00000362613 141 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 RNU6-546P-201ENST00000383991 107 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 Y_RNA.530-201ENST00000384587 101 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 BTF3L4P2-201ENST00000392798 346 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 RNA5SP181-201ENST00000410246 98 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 VN1R36P-201ENST00000414936 291 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 EIF1P1-201ENST00000421436 341 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC078809.1-201ENST00000427601 140 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 RPS27P27-201ENST00000498779 255 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC022447.4-201ENST00000504053 364 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC025465.4-201ENST00000513422 638 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 RN7SKP256-201ENST00000517201 314 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AL356157.2-201ENST00000605122 111 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC090617.10-201ENST00000624308 134 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC009541.1-201ENST00000438279 2662 ntBASIC2.1□□□□□ -2.07
NPIPA3F8WFD2 AC016717.2-201ENST00000609089 5141 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 SNORA80E-201ENST00000384744 137 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 RN7SKP61-201ENST00000410642 295 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 Y_RNA.619-201ENST00000410951 90 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 UBE2V1P4-201ENST00000425374 344 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 RPL23AP95-201ENST00000426806 265 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AL133396.1-201ENST00000432048 687 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 GPM6BP3-201ENST00000442797 145 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 U8.21-201ENST00000459536 136 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC145146.1-201ENST00000496370 254 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC016632.1-201ENST00000503994 196 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 FAM206BP-201ENST00000510179 541 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 RNU6-667P-201ENST00000517186 102 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC100830.2-201ENST00000581636 240 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 MIR3136-201ENST00000583498 78 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC018889.1-201ENST00000605372 397 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AC007014.2-201ENST00000615581 479 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 AL359757.2-201ENST00000624309 274 ntBASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.09□□□□□ -2.07
NPIPA3F8WFD2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.08
NPIPA3F8WFD2 AP000560.1-201ENST00000624150 1937 ntBASIC2.09□□□□□ -2.08
NPIPA3F8WFD2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 MIR21-201ENST00000362134 72 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 RNU6-227P-201ENST00000362865 103 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 RNU4-56P-201ENST00000364700 142 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 RNU6-142P-201ENST00000384019 107 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 SNORA12-201ENST00000391162 147 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 MIR1277-201ENST00000408536 78 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 RNU6-325P-201ENST00000411132 105 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 RNA5SP402-201ENST00000517148 110 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 SCOCP1-201ENST00000554676 349 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AC078795.3-201ENST00000602913 472 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AL161423.1-201ENST00000613700 262 ntBASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NPIPA3F8WFD2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms