Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TRBV4-1A0A0J9YWV2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORD81.2-201ENST00000365153 76 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-933P-201ENST00000384424 107 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR196B-201ENST00000384852 84 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR517A-201ENST00000385001 87 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC007064.1-201ENST00000412238 351 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL139396.1-201ENST00000421137 167 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC006946.1-201ENST00000429106 328 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC092473.1-201ENST00000441098 221 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL161788.1-201ENST00000441805 169 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 PCMTD1P1-201ENST00000455560 355 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNRPGP7-201ENST00000469016 106 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC002456.2-201ENST00000509356 380 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC021269.2-201ENST00000532318 330 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC016256.1-201ENST00000547971 354 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR4790-201ENST00000577799 79 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL034555.1-201ENST00000604816 211 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR3976-201ENST00000606807 139 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC046143.2-201ENST00000609789 160 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL355073.2-201ENST00000612106 557 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 HMGB1P24-202ENST00000615653 685 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORD98-201ENST00000636377 67 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC009541.1-201ENST00000438279 2662 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORA72.1-201ENST00000363485 129 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 Y_RNA.184-201ENST00000363884 108 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNA5SP240-201ENST00000365355 128 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-142P-201ENST00000384019 107 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-1032P-201ENST00000384100 107 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-784P-201ENST00000384330 106 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU2-63P-201ENST00000410792 194 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC018634.1-201ENST00000437554 401 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 HMGB1P18-201ENST00000438801 619 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 CYP2C59P-201ENST00000457790 269 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU7-26P-201ENST00000458980 63 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 Y_RNA.691-201ENST00000516611 103 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORA31.16-201ENST00000516773 139 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORA48.11-201ENST00000517015 89 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL078605.1-201ENST00000603529 500 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC124303.1-201ENST00000605703 360 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 uc_338.5-201ENST00000611839 155 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR6817-201ENST00000615588 66 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR6766-201ENST00000622641 72 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC006386.2-201ENST00000624491 75 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC012005.1-201ENST00000624575 75 ntBASIC2.1□□□□□ -2.07
TRBV4-1A0A0J9YWV2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU4-15P-201ENST00000362613 141 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNA5SP68-201ENST00000363885 119 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNY3P14-201ENST00000384309 102 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-1274P-201ENST00000384557 107 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR521-1-201ENST00000384902 87 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR524-201ENST00000385242 87 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RN7SKP158-201ENST00000410453 326 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL590135.1-201ENST00000422215 156 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC019205.3-201ENST00000424573 156 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RPS3AP12-201ENST00000443616 753 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC016700.2-201ENST00000446011 156 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL109933.2-201ENST00000452651 260 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC104435.1-201ENST00000483483 166 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC104564.1-201ENST00000493028 407 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC015911.1-201ENST00000495111 156 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC103851.1-201ENST00000506833 274 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC234781.5-201ENST00000508429 271 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNA5SP148-201ENST00000516527 94 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-586P-201ENST00000517265 104 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 CBX3P7-201ENST00000532876 502 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC021231.3-201ENST00000558497 370 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms