Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MIR4307-201ENST00000582802 84 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AL021368.1-201ENST00000607490 540 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-87P-201ENST00000607561 108 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AL365434.2-201ENST00000607979 234 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AP002782.1-201ENST00000623107 614 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AL445523.1-201ENST00000451184 1362 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC018630.2-201ENST00000534866 2403 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC009541.1-201ENST00000438279 2662 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC073343.1-201ENST00000328239 651 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 SNORA4.1-201ENST00000364263 144 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 SNORA32.2-201ENST00000384049 122 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-1179P-201ENST00000384667 107 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 MIR100-201ENST00000385259 80 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 EEF1A1P40-201ENST00000412883 573 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC006366.1-201ENST00000422002 759 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC004941.2-201ENST00000427009 228 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 MTND5P15-201ENST00000434246 349 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 SNRPEP8-201ENST00000442866 260 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC007547.1-201ENST00000462177 490 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 MTND3P5-201ENST00000512798 333 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC123904.2-201ENST00000548059 300 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 MIR5697-201ENST00000578045 78 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AL590229.1-201ENST00000603497 542 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC112187.2-201ENST00000604345 283 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AL353149.1-201ENST00000610667 244 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 PART1_2.1-201ENST00000612397 250 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AC012409.4-201ENST00000612923 249 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 AL138955.1-201ENST00000622881 1040 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 U4.7-201ENST00000638126 106 ntBASIC0.57□□□□□ -2.32
TRAV3A0A0B4J244 HSBP1P2-201ENST00000299671 229 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-862P-201ENST00000362804 105 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 SNORD31B-201ENST00000364977 69 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 RPS20P2-201ENST00000402520 389 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 RNU2-7P-201ENST00000410794 178 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL606490.4-201ENST00000423117 127 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 MTCO3P29-201ENST00000432119 779 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 snoU13.30-201ENST00000458951 104 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL049829.1-201ENST00000465411 156 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL163195.1-201ENST00000496941 348 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 SCARNA16.2-201ENST00000516520 172 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 RN7SKP88-201ENST00000516847 250 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 RNA5SP503-201ENST00000517047 117 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-165P-201ENST00000517170 99 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL442163.3-201ENST00000554110 156 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AL137100.2-201ENST00000555786 315 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 MIR3976-201ENST00000606807 139 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 7SK.8-201ENST00000612110 250 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 7SK.11-201ENST00000615477 250 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AC026585.1-201ENST00000619582 524 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 7SK.13-201ENST00000622040 250 ntBASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV3A0A0B4J244 AC008163.1-202ENST00000636004 2889 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-17P-201ENST00000384245 107 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 RNU6-18P-201ENST00000384527 107 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 MIR544A-201ENST00000384855 91 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 SNORA26.3-201ENST00000391119 136 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 MIR548J-201ENST00000408833 112 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 GTF2IP13-201ENST00000438487 386 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC132479.1-201ENST00000449160 144 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 MTCO3P28-201ENST00000513351 515 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 RNU7-51P-201ENST00000516560 62 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 MIR5000-201ENST00000577717 103 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 MIR3118-1-201ENST00000581787 76 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC107304.1-201ENST00000604229 296 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC105129.3-201ENST00000605455 485 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AL139286.2-201ENST00000606838 396 ntBASIC0.55□□□□□ -2.32
TRAV3A0A0B4J244 AL451064.1-201ENST00000607718 471 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms