Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 EIF4EP4-201ENST00000424916 578 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 MTND4P19-201ENST00000446659 478 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 RN7SL594P-201ENST00000470590 287 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AL121594.1-201ENST00000475906 575 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-911P-201ENST00000516523 104 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 SCARNA3-201ENST00000517097 143 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AP006245.1-201ENST00000522549 120 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR5004-201ENST00000579078 107 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR3616-201ENST00000584070 92 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AC092447.9-201ENST00000603395 144 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 Z98751.3-201ENST00000604447 521 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AL034555.1-201ENST00000604816 211 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AC016925.2-201ENST00000605108 242 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR30E-201ENST00000362104 92 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.31-201ENST00000362574 102 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.80-201ENST00000362996 102 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.364-201ENST00000365532 101 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORA22B-201ENST00000383876 138 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-120P-201ENST00000516077 103 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 RNA5SP54-201ENST00000516951 92 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 CBX3P7-201ENST00000532876 502 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AC005520.5-201ENST00000613926 164 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 AL450472.1-202ENST00000637286 180 ntBASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGA9Q9Y5G4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 PWAR6-201ENST00000552334 4618 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 RNY1P14-201ENST00000384426 108 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.526-201ENST00000384572 110 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR32-201ENST00000384965 70 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 UBA52P6-201ENST00000399822 382 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR320B2-201ENST00000408479 138 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 MTCO3P19-201ENST00000415864 321 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 BX679664.1-201ENST00000434429 253 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AF186996.7-201ENST00000492781 209 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR4513-201ENST00000581077 86 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 AL606534.2-204ENST00000635008 178 ntBASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHGA9Q9Y5G4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 RPS4XP2-201ENST00000458402 793 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC080013.2-201ENST00000460866 323 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC105758.1-201ENST00000506038 399 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms