Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SNORA31.6-201ENST00000516241 130 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 SCARNA17.2-201ENST00000516334 143 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 RNA5SP367-201ENST00000516557 118 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 HSPE1P4-201ENST00000550617 308 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AL137843.1-201ENST00000605078 385 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 AC009318.2-201ENST00000610917 651 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 SCARNA17.4-201ENST00000614296 143 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 RNU6-212P-201ENST00000362642 104 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 Y_RNA.48-201ENST00000362710 103 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 RNU6-1010P-201ENST00000362757 107 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 SNORD21-201ENST00000383953 95 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 Y_RNA.533-201ENST00000384596 114 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 SNORA41-201ENST00000384675 132 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 RNU2-23P-201ENST00000410545 195 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 Z92545.1-201ENST00000411782 234 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AC011816.1-201ENST00000441346 546 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 MIR2053-201ENST00000459295 91 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 RPL36AP48-201ENST00000485521 314 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AC091874.1-201ENST00000511402 339 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 RNU6-264P-201ENST00000517134 104 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 CBX3P8-201ENST00000532412 525 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 AL158827.2-201ENST00000602494 330 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AL080274.1-201ENST00000605565 220 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 AL691447.3-201ENST00000635020 330 ntBASIC2.76□□□□□ -1.97
PKP3Q9Y446 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PKP3Q9Y446 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PKP3Q9Y446 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PKP3Q9Y446 ZNF299P-201ENST00000406845 1804 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.75□□□□□ -1.97
PKP3Q9Y446 MIR369-201ENST00000362155 70 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 RNU6-142P-201ENST00000384019 107 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 RNU6-968P-201ENST00000384076 107 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 Y_RNA.504-201ENST00000384481 104 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AL138827.1-201ENST00000402666 306 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 MIR1302-11-201ENST00000408051 138 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 MIR1302-9-201ENST00000408365 138 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 MIR1302-10-201ENST00000408734 138 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AL354751.2-201ENST00000415471 210 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 COTL1P1-201ENST00000422309 375 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 NUP35P1-201ENST00000422734 947 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.75□□□□□ -1.97
PKP3Q9Y446 Z98742.2-201ENST00000431564 187 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC107083.1-201ENST00000439643 279 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC079354.2-201ENST00000453523 154 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC112771.1-201ENST00000463581 102 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC104564.1-201ENST00000493028 407 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 RPL22P13-201ENST00000493291 347 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC016632.1-201ENST00000503994 196 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC022447.4-201ENST00000504053 364 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC022493.2-201ENST00000506122 481 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.75□□□□□ -1.97
PKP3Q9Y446 RNU6-1153P-201ENST00000516760 105 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC115990.1-201ENST00000526957 301 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC007375.1-201ENST00000554513 578 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 MIR4765-201ENST00000585007 77 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 AC073410.2-201ENST00000603240 332 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 MIR1302-2-201ENST00000607096 138 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 MTND5P30-201ENST00000452896 1731 ntBASIC2.75□□□□□ -1.97
PKP3Q9Y446 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.75□□□□□ -1.97
PKP3Q9Y446 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PKP3Q9Y446 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC138915.1-201ENST00000565427 1685 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 U3.13-201ENST00000364804 214 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 SNORD42.2-201ENST00000365570 69 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 RN7SKP61-201ENST00000410642 295 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC078809.1-201ENST00000427601 140 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AL353997.1-201ENST00000432936 108 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC244670.1-201ENST00000436879 112 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 GSTA11P-201ENST00000452866 669 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 Y_RNA.639-201ENST00000458981 102 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.74□□□□□ -1.97
PKP3Q9Y446 RNU6-470P-201ENST00000515954 104 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC007536.1-201ENST00000533382 349 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AC079598.5-201ENST00000547460 117 ntBASIC2.74□□□□□ -1.97
PKP3Q9Y446 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.74□□□□□ -1.97
PKP3Q9Y446 MIR5696-201ENST00000578474 85 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms