Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 U6.114-201ENST00000636407 96 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 MIR340-201ENST00000362125 95 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 U8.1-201ENST00000362843 134 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 U3.9-201ENST00000363823 204 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 SNORD31B-201ENST00000364977 69 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 SNORD115-7-201ENST00000365306 82 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-925P-201ENST00000384629 104 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 SNORA26.3-201ENST00000391119 136 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 RNA5SP201-201ENST00000410316 124 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 RNU2-7P-201ENST00000410794 178 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC010975.2-201ENST00000427781 588 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 MTATP6P16-201ENST00000434543 526 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 SNRPFP4-201ENST00000456366 242 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC098862.1-201ENST00000504991 413 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-567P-201ENST00000516746 107 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AP003461.1-201ENST00000528866 78 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 RPL21P5-201ENST00000554662 472 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC008269.2-201ENST00000561915 1105 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC109446.1-201ENST00000566172 220 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC008751.2-201ENST00000597885 980 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 AC099654.13-201ENST00000639774 207 ntBASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RHBDD3Q9Y3P4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC245060.5-201ENST00000610778 3293 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-457P-201ENST00000363999 107 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-116P-201ENST00000384042 109 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 EIF1P1-201ENST00000421436 341 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 SNRPEP8-201ENST00000442866 260 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC013470.1-201ENST00000453438 462 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC108078.1-201ENST00000508073 725 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC100821.1-201ENST00000523153 2479 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AP005597.4-201ENST00000526762 229 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 ELOCP32-201ENST00000548625 324 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC009977.1-201ENST00000586015 570 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC090578.1-201ENST00000604955 591 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AL121992.2-201ENST00000606262 256 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AL078604.3-201ENST00000615580 211 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 AC027807.2-201ENST00000616099 408 ntBASIC1.19□□□□□ -2.22
RHBDD3Q9Y3P4 MTND5P35-201ENST00000557537 1720 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 RNU5F-7P-201ENST00000363696 115 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 ARL5AP1-201ENST00000418991 388 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC002486.1-201ENST00000435098 391 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AL022238.1-201ENST00000442557 355 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC079781.2-201ENST00000446424 169 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC016925.1-201ENST00000458303 298 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 SCARNA24.1-201ENST00000516465 137 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-410P-201ENST00000517006 107 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC012507.3-201ENST00000603556 477 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 uc_338.11-201ENST00000619132 160 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 AC007671.2-201ENST00000637344 619 ntBASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-37P-201ENST00000362692 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-1287P-201ENST00000362914 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-11P-201ENST00000364234 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-169P-201ENST00000365336 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-25P-201ENST00000383873 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-1-201ENST00000383898 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-48P-201ENST00000384161 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-36P-201ENST00000384172 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-4P-201ENST00000384205 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-5P-201ENST00000384238 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-3P-201ENST00000384314 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 Y_RNA.480-201ENST00000384364 102 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-16P-201ENST00000384385 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-15P-201ENST00000384534 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms