Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RNA5SP205-201ENST00000364653 136 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RNU6-290P-201ENST00000365212 101 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RNY4P28-201ENST00000365281 93 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RNU6-651P-201ENST00000411040 105 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RNU6-516P-201ENST00000411381 104 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 CST9LP2-201ENST00000437612 320 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC008267.6-201ENST00000441664 139 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC133134.1-201ENST00000466800 359 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 IGLVIV-53-201ENST00000520107 367 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC024405.2-202ENST00000532731 184 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 SNRPGP16-201ENST00000533275 226 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC112693.2-201ENST00000556538 232 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 FAM60BP-201ENST00000578364 658 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC025588.3-201ENST00000604182 274 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC005828.6-201ENST00000606610 232 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 uc_338.1-201ENST00000612113 180 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 ASNSP1-201ENST00000518311 1939 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 HAUS6P2-201ENST00000433254 2404 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 MIR148B-201ENST00000362252 99 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.273-201ENST00000364703 102 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RNU6-80P-201ENST00000384195 107 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 MIR137-201ENST00000385223 102 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AL513475.1-201ENST00000406602 315 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC126124.2-201ENST00000413542 321 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 RPS15AP40-201ENST00000419621 391 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 MTCO1P39-201ENST00000426148 480 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AL162725.1-201ENST00000435405 301 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 uc_338.32-201ENST00000615087 172 ntBASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.623-201ENST00000411128 95 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AL591704.1-201ENST00000432574 275 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 GAPDHP27-201ENST00000447427 1020 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AL360271.2-201ENST00000447710 161 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 RPS27P26-201ENST00000494583 239 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 RNU6-991P-201ENST00000516168 107 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 MIR892C-201ENST00000516410 77 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 TGIF1P1-201ENST00000558095 802 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AC007566.2-201ENST00000603642 413 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AL121917.1-203ENST00000605534 577 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 MIR6130-201ENST00000619419 109 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AF117829.1-206ENST00000621883 3802 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 AC010329.2-201ENST00000595195 2737 ntBASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NOTCH3Q9UM47 RNU6-1266P-201ENST00000362794 105 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 SNORA71.1-201ENST00000364523 117 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.275-201ENST00000364726 110 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 SNORD116-18-201ENST00000383961 92 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 AL096701.2-201ENST00000416920 238 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 HMGN1P18-201ENST00000457642 277 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 RPL21P104-201ENST00000464143 478 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 AC010631.1-201ENST00000474150 156 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 MTND3P25-201ENST00000509243 135 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 MIR2114-201ENST00000516645 80 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 TRAV37-201ENST00000553906 342 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 MIR8076-201ENST00000611401 83 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 AC064859.1-201ENST00000624741 174 ntBASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
NOTCH3Q9UM47 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 SDAD1P2-201ENST00000441308 2028 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.118-201ENST00000363300 101 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 SNORD113-8-201ENST00000363497 74 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.240-201ENST00000364469 95 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 RNU6-708P-201ENST00000384217 107 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 MIR9-1-201ENST00000385198 89 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 RNU4-30P-201ENST00000410245 143 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 RNU6-1218P-201ENST00000458990 108 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 RN7SKP210-201ENST00000459176 261 ntBASIC2.27□□□□□ -2.05
NOTCH3Q9UM47 AC021205.2-201ENST00000480069 347 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms