Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 KC877373.1-201ENST00000479066 408 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AL049830.2-201ENST00000480072 201 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU2-58P-201ENST00000516403 183 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-861P-201ENST00000516745 106 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 Y_RNA.703-201ENST00000516846 111 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-1212P-201ENST00000517023 104 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AC245166.1-201ENST00000521012 253 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AC093331.1-201ENST00000521474 169 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 MED28P6-201ENST00000558776 231 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AC090617.3-201ENST00000573670 475 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 Y_RNA.286-201ENST00000364813 102 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-47P-201ENST00000383866 107 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-651P-201ENST00000411040 105 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 PIGFP3-201ENST00000441918 722 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 snoU13.30-201ENST00000458951 104 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RPS20P22-201ENST00000473700 357 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 SNORA25.14-201ENST00000516481 132 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 SNORA31.18-201ENST00000517043 134 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RNA5SP165-201ENST00000517142 115 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 MIR7975-201ENST00000619350 68 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AC097372.5-201ENST00000623665 376 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PACSIN3Q9UKS6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AL049781.1-201ENST00000623195 3585 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-78P-201ENST00000362897 107 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-290P-201ENST00000365212 101 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-318P-201ENST00000384283 103 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 MIR34A-201ENST00000385130 110 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 MIR23A-201ENST00000385245 73 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 SNORD78.2-201ENST00000391076 69 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 PTMAP5-201ENST00000393073 333 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RN7SKP51-201ENST00000410781 304 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 Y_RNA.626-201ENST00000411288 95 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AL358453.1-201ENST00000422522 250 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RPL27AP8-201ENST00000424277 446 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AL445305.1-201ENST00000432577 575 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RN7SL75P-201ENST00000461926 281 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 RPL23AP75-201ENST00000491601 451 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 SNORD116-28-201ENST00000516123 91 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 MIR2355-201ENST00000517199 87 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AC021753.1-201ENST00000635724 168 ntBASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PACSIN3Q9UKS6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AC233981.2-201ENST00000611524 1614 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-740P-201ENST00000364734 105 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-378P-201ENST00000384324 107 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 EI24P2-201ENST00000397776 1076 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RNU4-30P-201ENST00000410245 143 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RNU2-37P-201ENST00000410695 177 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RPL23AP83-201ENST00000434984 473 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 CYCSP32-201ENST00000440548 321 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AL078601.1-201ENST00000444542 271 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AC016700.2-201ENST00000446011 156 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RBMY2UP-201ENST00000453474 324 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RPL32P34-201ENST00000486380 400 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
PACSIN3Q9UKS6 SNORA31.8-201ENST00000516327 108 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms