Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU4-20P-201ENST00000365601 151 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 RNU6-74P-201ENST00000384235 107 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.573-201ENST00000384763 105 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 RNA5SP270-201ENST00000411361 118 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL354751.2-201ENST00000415471 210 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC114491.1-201ENST00000416095 246 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC097463.2-201ENST00000421074 142 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 FABP5P13-201ENST00000452144 328 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC117503.1-201ENST00000472241 394 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC083798.1-201ENST00000472671 131 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 MTCO3P9-201ENST00000506989 781 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC108078.2-201ENST00000510750 236 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC010493.1-201ENST00000513479 292 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 SNORA40.12-201ENST00000516329 111 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AP003034.1-201ENST00000534621 422 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 MIR4524B-201ENST00000581569 115 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC010525.2-201ENST00000590920 195 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC078899.2-201ENST00000595282 212 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL162413.1-201ENST00000603198 110 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL670379.10-201ENST00000604330 253 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL670379.9-201ENST00000605428 253 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC021646.1-201ENST00000605469 484 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL121992.2-201ENST00000606262 256 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL133255.1-201ENST00000606374 441 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AL162373.1-201ENST00000620433 407 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC098657.3-201ENST00000620434 263 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 CENPCP1-201ENST00000533085 2578 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 RNA5SP432-201ENST00000362480 116 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RNU6-845P-201ENST00000362578 103 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RNU4-79P-201ENST00000362764 141 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 U8.13-201ENST00000390842 128 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 MTCYBP8-201ENST00000422855 651 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AL160275.3-201ENST00000423876 471 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC093019.1-201ENST00000443135 252 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RPL7P43-201ENST00000478876 753 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RPL36AP48-201ENST00000485521 314 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC079382.1-201ENST00000493346 557 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RNU6-277P-201ENST00000516272 106 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 OR5AL2P-201ENST00000532185 920 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC015712.3-201ENST00000559380 164 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 MIR3935-201ENST00000583472 104 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC022432.1-201ENST00000595739 310 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AP001486.3-201ENST00000615334 372 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 SDR42E1P4-201ENST00000620894 481 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 uc_338.20-201ENST00000621563 178 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 AC009161.2-201ENST00000624626 138 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 Z75746.1-201ENST00000440243 2080 ntBASIC2.32□□□□□ -2.04
CLIP2Q9UDT6 RNY1P12-201ENST00000364251 105 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 RNU6-1322P-201ENST00000364309 107 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 SNORA24.1-201ENST00000384401 135 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AC019129.1-201ENST00000403786 261 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AL627311.1-201ENST00000431514 115 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AL583843.1-201ENST00000456070 346 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 MTND4P17-201ENST00000470444 350 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AC103851.1-201ENST00000506833 274 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AC105029.1-201ENST00000520250 669 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AC018638.8-201ENST00000588755 281 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AL138889.2-201ENST00000603883 242 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AC005034.5-201ENST00000604219 466 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AL354950.2-201ENST00000617939 290 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AC091932.3-201ENST00000624223 323 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 AL133216.2-202ENST00000634512 349 ntBASIC2.31□□□□□ -2.04
CLIP2Q9UDT6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 ZNF355P-201ENST00000427301 3216 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC138393.1-203ENST00000327086 343 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.67-201ENST00000362870 100 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 SNORA16B-201ENST00000364674 135 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.367-201ENST00000365544 101 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms