Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC093591.1-201ENST00000491435 481 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RPL21P16-201ENST00000495531 483 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RNU6-1016P-201ENST00000516689 94 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC007375.1-201ENST00000554513 578 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC006023.1-201ENST00000603944 259 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AL034555.1-201ENST00000604816 211 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AL033523.1-201ENST00000605153 153 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC016727.1-205ENST00000605437 569 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN1Q9P244 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN1Q9P244 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN1Q9P244 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
LRFN1Q9P244 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
LRFN1Q9P244 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRFN1Q9P244 SNORD56.3-201ENST00000363507 71 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 RNA5SP125-201ENST00000364843 120 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 Y_RNA.419-201ENST00000384041 102 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AL591034.2-201ENST00000402839 359 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 RPS20P15-201ENST00000412792 311 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AL590135.1-201ENST00000422215 156 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC019205.3-201ENST00000424573 156 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.82□□□□□ -1.96
LRFN1Q9P244 GPM6BP3-201ENST00000442797 145 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC016700.2-201ENST00000446011 156 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC008571.1-201ENST00000467232 300 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC015911.1-201ENST00000495111 156 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LRFN1Q9P244 RPPH1-2P-201ENST00000516688 293 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 SNORA31.16-201ENST00000516773 139 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AL138963.2-201ENST00000605137 226 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC116312.1-201ENST00000606841 314 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AL359757.2-201ENST00000624309 274 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC073476.4-201ENST00000628409 72 ntBASIC2.82□□□□□ -1.96
LRFN1Q9P244 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.82□□□□□ -1.96
LRFN1Q9P244 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LRFN1Q9P244 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
LRFN1Q9P244 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRFN1Q9P244 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LRFN1Q9P244 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRFN1Q9P244 RNA5SP240-201ENST00000365355 128 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 RNU6-601P-201ENST00000384540 107 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 MIR29B2-201ENST00000385055 81 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.81□□□□□ -1.96
LRFN1Q9P244 EIF4EP2-201ENST00000422816 654 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 Z82205.1-201ENST00000428456 297 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC107083.1-201ENST00000439643 279 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AL161788.1-201ENST00000441805 169 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC079354.2-201ENST00000453523 154 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 RN7SL429P-201ENST00000479090 223 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 RN7SL489P-201ENST00000486185 223 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 RN7SL327P-201ENST00000488659 223 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 RNU6-567P-201ENST00000516746 107 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.81□□□□□ -1.96
LRFN1Q9P244 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.81□□□□□ -1.96
LRFN1Q9P244 FRG2DP-202ENST00000566967 323 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC044792.1-201ENST00000593294 196 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AL670379.2-201ENST00000604983 252 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC018462.2-201ENST00000605375 395 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 RN7SL853P-201ENST00000617250 223 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC008121.3-201ENST00000618726 433 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC090574.1-201ENST00000623186 233 ntBASIC2.81□□□□□ -1.96
LRFN1Q9P244 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.81□□□□□ -1.96
LRFN1Q9P244 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRFN1Q9P244 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 SNORD50.1-201ENST00000362987 71 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 RNU6-1286P-201ENST00000383871 107 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 Y_RNA.460-201ENST00000384255 102 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 RNU6-174P-201ENST00000410406 106 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 RNU2-63P-201ENST00000410792 194 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 USP9YP30-201ENST00000430729 455 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC090096.1-201ENST00000489168 390 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 HMGN1P13-201ENST00000505795 138 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC026782.1-201ENST00000512952 449 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 RNU6-559P-201ENST00000516151 98 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 SNORA48.11-201ENST00000517015 89 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 RNU6-586P-201ENST00000517265 104 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC245166.1-201ENST00000521012 253 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 MTCO3P13-201ENST00000577757 781 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 AL078605.1-201ENST00000603529 500 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 AL353621.2-201ENST00000605340 133 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms