Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL121890.5-201ENST00000620848 304 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 MTND4P16-201ENST00000466108 1367 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 RNU6-655P-201ENST00000362858 107 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 RNU6-960P-201ENST00000364056 120 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.480-201ENST00000384364 102 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 RAP1BP3-201ENST00000407180 549 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 UBE2D3P4-201ENST00000441973 436 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 snoU109.2-201ENST00000459316 135 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 SNORD42A-201ENST00000459584 64 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 MTCO2P29-201ENST00000465212 189 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 RPL30P1-201ENST00000488676 339 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 FABP5P5-201ENST00000515537 406 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AC090572.1-201ENST00000519251 160 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AP001893.2-201ENST00000526949 202 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 BNIP3P40-201ENST00000596017 556 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AC245884.10-201ENST00000597355 337 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AC093648.1-201ENST00000623546 606 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AC092656.1-203ENST00000624134 423 ntBASIC0.87□□□□□ -2.27
CCDC88CQ9P219 AC245060.5-201ENST00000610778 3293 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RNU6-78P-201ENST00000362897 107 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RNU6-371P-201ENST00000364283 108 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RNU1-133P-201ENST00000364867 167 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RPS3AP36-201ENST00000398190 775 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RNA5SP501-201ENST00000410990 112 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 OR6C66P-201ENST00000414917 930 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AL591704.2-201ENST00000421658 181 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AL590556.1-201ENST00000423231 483 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 CST2P1-201ENST00000425770 87 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 FTH1P12-201ENST00000432137 551 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 EPS15P1-201ENST00000448836 336 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MTCYBP1-201ENST00000454315 1119 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 SNRPFP3-201ENST00000457792 225 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MTND3P7-201ENST00000474435 343 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AP000797.1-201ENST00000478870 387 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AP000763.2-201ENST00000540641 163 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MIR3915-201ENST00000578518 97 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 BNIP3P39-201ENST00000601077 554 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AL359999.1-201ENST00000604513 294 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AL139286.2-201ENST00000606838 396 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC007494.3-201ENST00000624660 743 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 OR4G2P-201ENST00000328113 903 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RNA5SP493-201ENST00000364115 91 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 SNORD114-6-201ENST00000364393 72 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 RNU6-43P-201ENST00000384302 107 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MRPL42P2-201ENST00000403169 426 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC010099.3-201ENST00000423896 409 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC117522.1-201ENST00000509821 380 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC88CQ9P219 SNORA3.4-201ENST00000515969 96 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MTATP6P24-201ENST00000576835 677 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 DEFB131E-202ENST00000602581 683 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AL391646.1-201ENST00000603860 190 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC122133.1-201ENST00000613964 233 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC009878.1-201ENST00000621819 340 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 AC006927.3-201ENST00000638789 384 ntBASIC0.86□□□□□ -2.27
CCDC88CQ9P219 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.67-201ENST00000362870 100 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 RNU5F-6P-201ENST00000362979 116 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.159-201ENST00000363674 87 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.324-201ENST00000365165 102 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 RNU6-108P-201ENST00000365558 107 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 MIR186-201ENST00000384988 86 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 MTCYBP36-201ENST00000404146 440 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 RNU6-195P-201ENST00000411352 109 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 MTND2P18-201ENST00000419962 1030 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AC069257.2-201ENST00000441819 155 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 RPL39P29-201ENST00000447779 157 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms