Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 AC092447.9-201ENST00000603395 144 ntBASIC-0.63□□□□□ -2.51
CCDC180Q9P1Z9 AC239868.4-201ENST00000608318 671 ntBASIC-0.63□□□□□ -2.51
CCDC180Q9P1Z9 AC018926.1-201ENST00000616335 435 ntBASIC-0.63□□□□□ -2.51
CCDC180Q9P1Z9 FTX_2.1-201ENST00000618816 94 ntBASIC-0.63□□□□□ -2.51
CCDC180Q9P1Z9 AP003072.5-201ENST00000623872 773 ntBASIC-0.63□□□□□ -2.51
CCDC180Q9P1Z9 AC010615.1-201ENST00000594254 1764 ntBASIC-0.63□□□□□ -2.51
CCDC180Q9P1Z9 AC092268.1-201ENST00000342691 405 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 MIR610-201ENST00000385139 96 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 HMGB1P28-201ENST00000507778 552 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 SNORA76.2-201ENST00000517095 137 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC105185.1-201ENST00000518705 535 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 IGKV1-22-201ENST00000524313 326 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 LSM6P2-201ENST00000552208 177 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC004805.2-201ENST00000605382 482 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC004067.1-201ENST00000608733 700 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 RNU2-33P-201ENST00000410344 192 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC007435.1-201ENST00000421086 415 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC060773.1-201ENST00000421698 310 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 RPS27AP8-201ENST00000452665 445 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 RNU6-333P-201ENST00000459117 107 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AL442163.3-201ENST00000554110 156 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC087685.1-201ENST00000587507 141 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC025449.1-201ENST00000603896 529 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 AC007363.1-201ENST00000604736 620 ntBASIC-0.64□□□□□ -2.51
CCDC180Q9P1Z9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 SNORD115-24-201ENST00000363528 82 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 SNORA1.1-201ENST00000364671 133 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 RNA5SP109-201ENST00000391010 116 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 RPL39P38-201ENST00000467018 153 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 MIR4723-201ENST00000585070 81 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 AC012065.4-201ENST00000602445 679 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 AC117490.2-201ENST00000610042 594 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 AC138627.2-201ENST00000624202 601 ntBASIC-0.65□□□□□ -2.51
CCDC180Q9P1Z9 SNORD114-19-201ENST00000363072 75 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 RNU6-743P-201ENST00000364151 106 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 snoU13.27-201ENST00000459278 104 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 AL160314.1-201ENST00000490836 438 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 AC114981.1-201ENST00000503897 678 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 AC097065.2-201ENST00000608159 533 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 AL355816.2-201ENST00000610049 647 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 AC009318.4-201ENST00000620496 486 ntBASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.66□□□□□ -2.51
CCDC180Q9P1Z9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
CCDC180Q9P1Z9 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 RNU6-444P-201ENST00000383988 108 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 MIR593-201ENST00000384856 100 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 MIR196A2-201ENST00000385189 110 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 MIR140-201ENST00000385282 100 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 RNU6-233P-201ENST00000410845 141 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AC016925.1-201ENST00000458303 298 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 SNORA25.12-201ENST00000516202 82 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 RNU6-965P-201ENST00000516721 96 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AC023158.1-201ENST00000561632 1025 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AL353997.4-201ENST00000586196 166 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 HMGB1P30-201ENST00000492455 606 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AL133445.2-201ENST00000611191 527 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AP005212.4-201ENST00000614206 710 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 SNORD3E-202ENST00000627253 216 ntBASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC180Q9P1Z9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 FO393419.3-201ENST00000428741 282 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 SNORD57-201ENST00000448188 72 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 NFU1P2-201ENST00000448700 469 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 MTCO3P2-201ENST00000457365 171 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 RNU7-21P-201ENST00000459430 62 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 AC135803.1-201ENST00000608748 565 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 AL596245.1-201ENST00000618994 362 ntBASIC-0.68□□□□□ -2.52
CCDC180Q9P1Z9 MIR1468-201ENST00000410600 86 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 AC011233.1-201ENST00000422812 283 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 TXNL1P1-201ENST00000429528 554 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 MTND1P28-201ENST00000435623 950 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 AC097473.1-201ENST00000508142 408 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 MTCYBP43-201ENST00000513621 740 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 RNA5SP437-201ENST00000517249 129 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 AC005176.2-201ENST00000596933 147 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 AL121992.2-201ENST00000606262 256 ntBASIC-0.69□□□□□ -2.52
CCDC180Q9P1Z9 AC008147.4-201ENST00000617570 1204 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms