Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.63□□□□□ -1.99
HCN3Q9P1Z3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HCN3Q9P1Z3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HCN3Q9P1Z3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.63□□□□□ -1.99
HCN3Q9P1Z3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HCN3Q9P1Z3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 RNU1-72P-201ENST00000362976 153 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 CBX3P9-201ENST00000402326 552 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AL590004.2-201ENST00000404787 371 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AL356432.1-201ENST00000405809 419 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 MIR548K-201ENST00000408406 116 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 RNU2-63P-201ENST00000410792 194 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AC078809.1-201ENST00000427601 140 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 MTATP6P23-201ENST00000440153 476 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 MTND5P20-201ENST00000448677 143 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AL138963.2-201ENST00000605137 226 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HCN3Q9P1Z3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RNU4-56P-201ENST00000364700 142 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RNA5SP125-201ENST00000364843 120 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 U8.8-201ENST00000365399 135 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RNU6-142P-201ENST00000384019 107 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RN7SKP61-201ENST00000410642 295 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RPL37P10-201ENST00000412884 288 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RPL23AP95-201ENST00000426806 265 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AL133396.1-201ENST00000432048 687 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AL353752.1-201ENST00000454946 260 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RNU7-26P-201ENST00000458980 63 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 MTND4P17-201ENST00000470444 350 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AC091951.2-201ENST00000500762 203 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RNU6-507P-201ENST00000516045 100 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 SNORA31.16-201ENST00000516773 139 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 Y_RNA.702-201ENST00000516843 96 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AC023824.2-201ENST00000566185 400 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 AL713866.2-201ENST00000603579 219 ntBASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN3Q9P1Z3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC092268.1-201ENST00000342691 405 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AL590556.1-201ENST00000423231 483 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 DAP3P1-201ENST00000441522 278 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 CYP2C59P-201ENST00000457790 269 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 HMGB1P35-201ENST00000503360 598 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC116337.1-201ENST00000509680 687 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 RNA5SP356-201ENST00000515972 94 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 RNU6-586P-201ENST00000517265 104 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 MIR3136-201ENST00000583498 78 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC078795.3-201ENST00000602913 472 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AL355297.2-201ENST00000604792 129 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AL034555.1-201ENST00000604816 211 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC063943.3-201ENST00000615562 356 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC009233.1-201ENST00000616477 371 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AL449363.1-201ENST00000617815 186 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC008121.3-201ENST00000618726 433 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AC092794.2-201ENST00000620933 563 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 AP000560.1-201ENST00000624150 1937 ntBASIC2.6□□□□□ -1.99
HCN3Q9P1Z3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HCN3Q9P1Z3 SNORA36A-201ENST00000384221 132 ntBASIC2.59□□□□□ -1.99
HCN3Q9P1Z3 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -1.99
HCN3Q9P1Z3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.59□□□□□ -1.99
HCN3Q9P1Z3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms