Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 AC109446.1-201ENST00000566172 220 ntBASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 MIR1302-2-201ENST00000607096 138 ntBASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 MIR3199-2-201ENST00000636243 86 ntBASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCAL1Q9NZC9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 MIR21-201ENST00000362134 72 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.48-201ENST00000362710 103 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-105P-201ENST00000363909 104 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.216-201ENST00000364205 93 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 MIR521-1-201ENST00000384902 87 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 MIR9-1-201ENST00000385198 89 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 RNU2-49P-201ENST00000410666 184 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 MTCYBP6-201ENST00000441810 138 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.639-201ENST00000458981 102 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 AC020661.2-201ENST00000560114 134 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 AC004852.3-201ENST00000614131 326 ntBASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.63□□□□□ -1.99
SMARCAL1Q9NZC9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC069528.2-201ENST00000624849 1991 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC008669.1-201ENST00000565823 2178 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-308P-201ENST00000390957 107 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 RPS29P13-201ENST00000402041 169 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 BX276092.3-201ENST00000424182 230 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 RPS12P2-201ENST00000439728 269 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 SNORD109B-201ENST00000458961 67 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 SNORD109A-201ENST00000459128 67 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 RNU7-23P-201ENST00000459465 62 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-612P-201ENST00000516909 102 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AP003072.1-201ENST00000531740 145 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC011471.1-201ENST00000585766 187 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 AC134503.1-201ENST00000633048 54 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 MTND5P10-201ENST00000603719 1809 ntBASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.62□□□□□ -1.99
SMARCAL1Q9NZC9 MAPK10-266ENST00000641066 6555 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.31-201ENST00000362574 102 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 SNORD56.1-201ENST00000362913 68 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.197-201ENST00000364004 102 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.445-201ENST00000384168 102 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 SNORA11.2-201ENST00000408318 127 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-174P-201ENST00000410406 106 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 USMG5P1-201ENST00000425964 177 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AL161651.1-201ENST00000440882 223 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 DAP3P1-201ENST00000441522 278 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 U8.21-201ENST00000459536 136 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 ACA59.1-201ENST00000515966 143 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 SNORA31.18-201ENST00000517043 134 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AP005902.1-201ENST00000521358 186 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC010186.2-204ENST00000537668 439 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 MIR3171-201ENST00000584270 74 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC241585.2-209ENST00000638217 143 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
SMARCAL1Q9NZC9 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-859P-201ENST00000362728 107 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-1040P-201ENST00000383974 107 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RNU6-692P-201ENST00000384496 107 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 SNORA75.6-201ENST00000391318 127 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms