Protein–RNA interactions for Protein: Q9NVR0

KLHL11, Kelch-like protein 11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL11Q9NVR0 AC006028.1-201ENST00000438379 402 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 RNU7-169P-201ENST00000459456 61 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 RPL22P13-201ENST00000493291 347 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 AC093852.1-201ENST00000503587 266 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 Y_RNA.715-201ENST00000517082 110 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 AC040926.1-201ENST00000530195 238 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 VN1R91P-201ENST00000594377 169 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 uc_338.14-201ENST00000613162 166 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.36□□□□□ -1.87
KLHL11Q9NVR0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 RNU6-227P-201ENST00000362865 103 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 Y_RNA.210-201ENST00000364161 110 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 U3.26-201ENST00000391236 204 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 AL512633.1-201ENST00000399931 655 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 OR2AQ1P-201ENST00000451972 200 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 MTCO3P8-201ENST00000453691 755 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 RPS29P27-201ENST00000463711 170 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 MED28P2-201ENST00000475771 317 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 AC010186.2-204ENST00000537668 439 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 AC024153.1-201ENST00000603103 365 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 AC009318.2-201ENST00000610917 651 ntBASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
KLHL11Q9NVR0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 Y_RNA.526-201ENST00000384572 110 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 MIR634-201ENST00000385208 97 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 CBX3P6-201ENST00000430257 527 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 RPL21P2-201ENST00000440049 481 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 AC079354.2-201ENST00000453523 154 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 RPL30P10-201ENST00000488148 337 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 SNORA43.2-201ENST00000516652 128 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 SCARNA13-201ENST00000516672 275 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 MIR2682-201ENST00000580305 110 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 MIR3668-201ENST00000582138 75 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 AC090425.1-201ENST00000610007 140 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 uc_338.25-201ENST00000613756 156 ntBASIC3.34□□□□□ -1.87
KLHL11Q9NVR0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
KLHL11Q9NVR0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 Y_RNA.188-201ENST00000363952 111 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 SNORA63.7-201ENST00000365579 123 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 RNU6-784P-201ENST00000384330 106 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 Y_RNA.512-201ENST00000384518 102 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 SNORD116-20-201ENST00000384529 92 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC073910.1-201ENST00000445047 438 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 RPL23AP49-201ENST00000492925 468 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 CR383656.8-201ENST00000549046 145 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 MYL12BP1-201ENST00000569826 507 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 U2.1-201ENST00000618978 145 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 AC138915.1-201ENST00000565427 1685 ntBASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KLHL11Q9NVR0 ZNF826P-207ENST00000622273 1910 ntBASIC3.32□□□□□ -1.88
KLHL11Q9NVR0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.32□□□□□ -1.88
KLHL11Q9NVR0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.32□□□□□ -1.88
KLHL11Q9NVR0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms