Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 RNU7-169P-201ENST00000459456 61 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 TOMM22P6-201ENST00000465035 409 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 RPL27AP5-201ENST00000469428 449 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 RPL31P41-201ENST00000477967 372 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 AC090525.1-201ENST00000479116 478 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 RPL23AP94-201ENST00000512518 302 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 MIR4513-201ENST00000581077 86 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 MIR3124-201ENST00000582636 67 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 AC016727.2-201ENST00000603988 621 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 Z98751.3-201ENST00000604447 521 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 AL034555.1-201ENST00000604816 211 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 SNORD58B-201ENST00000607313 66 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 U2.1-201ENST00000618978 145 ntBASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCM2LQ9NUG4 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 RNU6-874P-201ENST00000362390 105 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 RNU6-655P-201ENST00000362858 107 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 RPS26P42-201ENST00000413485 326 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 Z98742.2-201ENST00000431564 187 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AC115115.1-201ENST00000449927 248 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 RPL21P10-201ENST00000463521 490 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 ANXA2P1-201ENST00000505539 926 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 SNORA31.16-201ENST00000516773 139 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 RN7SKP272-201ENST00000516988 232 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AC007458.1-201ENST00000542812 373 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AC008739.2-201ENST00000597006 317 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AL133393.1-201ENST00000603277 287 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AL162730.1-201ENST00000605734 292 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AL162373.1-201ENST00000620433 407 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AC138305.3-201ENST00000624988 240 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 AL365361.1-201ENST00000566942 3481 ntBASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCM2LQ9NUG4 Z75746.1-201ENST00000440243 2080 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 OR56A5-201ENST00000340110 738 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNU6-486P-201ENST00000363116 107 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNY3P11-201ENST00000364153 102 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNU6-985P-201ENST00000410182 104 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 MTCO3P19-201ENST00000415864 321 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC113618.1-201ENST00000416747 285 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC097463.2-201ENST00000421074 142 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 MTND5P22-201ENST00000458380 195 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNU7-87P-201ENST00000459343 62 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 HMGB1P35-201ENST00000503360 598 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 RNU6-764P-201ENST00000516396 105 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 MIR2355-201ENST00000517199 87 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC008737.2-201ENST00000599446 118 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC136443.5-201ENST00000603741 370 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AL138963.2-201ENST00000605137 226 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 MIR6852-201ENST00000621699 66 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 MAPK10-362ENST00000641864 4484 ntBASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
CCM2LQ9NUG4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 RNU6-529P-201ENST00000363383 104 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 RNU6-101P-201ENST00000410323 104 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 AC114482.1-201ENST00000418010 247 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 AIMP1P2-201ENST00000425294 312 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 AC096644.2-201ENST00000429278 159 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 USP9YP16-201ENST00000430287 407 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 CHEK2P4-201ENST00000450340 246 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 USP9YP23-201ENST00000455085 407 ntBASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.23□□□□□ -1.89
CCM2LQ9NUG4 AL121594.1-201ENST00000475906 575 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms