Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 TPRKBP2-201ENST00000565969 475 ntBASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 AC064836.2-201ENST00000609491 462 ntBASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 DISC2.1-201ENST00000612827 205 ntBASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 FER-210ENST00000628534 558 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC3Q9NQT5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-451P-201ENST00000362921 107 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-1285P-201ENST00000363480 105 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 RNU4-12P-201ENST00000365233 139 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 Y_RNA.373-201ENST00000365600 103 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-1215P-201ENST00000384441 102 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 MIR181A1-201ENST00000385026 110 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 MIR561-201ENST00000385216 97 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 Y_RNA.615-201ENST00000410769 117 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 RNA5SP508-201ENST00000411327 119 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 MRPS10P2-201ENST00000431226 381 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 SNAP23P1-201ENST00000433229 246 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 MTND3P21-201ENST00000433774 331 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 ERLEC1P1-201ENST00000433806 578 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AL353705.4-201ENST00000449661 238 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 RPL38P4-201ENST00000502376 214 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AC091874.1-201ENST00000511402 339 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AC087854.1-201ENST00000519706 414 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 MTND1P35-201ENST00000526739 508 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 HSPE1P4-201ENST00000550617 308 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AL157687.1-201ENST00000554853 619 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 BNIP3P25-201ENST00000596023 559 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AC139792.2-201ENST00000624218 587 ntBASIC1.86□□□□□ -2.11
EXOSC3Q9NQT5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 RNY3P3-201ENST00000363816 102 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 SNORD32A-201ENST00000364805 84 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 MIR524-201ENST00000385242 87 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 RNU2-32P-201ENST00000411193 191 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AL139156.1-201ENST00000412785 841 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 MTCO1P21-201ENST00000416634 589 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AL139415.2-201ENST00000431968 163 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 RPS15AP10-201ENST00000432472 382 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-965P-201ENST00000516721 96 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 SNORA31.16-201ENST00000516773 139 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 HSPE1P18-201ENST00000517602 280 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AP000763.2-201ENST00000540641 163 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 MIR3126-201ENST00000577443 74 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 VN1R107P-201ENST00000601784 209 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 ELOCP5-201ENST00000604924 333 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AC068944.2-201ENST00000610373 403 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 AC245884.12-201ENST00000615364 59 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 SNORD98-201ENST00000636377 67 ntBASIC1.85□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-1252P-201ENST00000363054 104 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RN7SKP32-201ENST00000410167 303 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 Y_RNA.597-201ENST00000410463 100 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 ARL5AP1-201ENST00000418991 388 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AL590135.1-201ENST00000422215 156 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC019205.3-201ENST00000424573 156 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC244670.1-201ENST00000436879 112 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 MTCO2P3-201ENST00000442543 421 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC016700.2-201ENST00000446011 156 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC015911.1-201ENST00000495111 156 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC008628.2-201ENST00000502605 298 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 HMGB1P35-201ENST00000503360 598 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 Y_RNA.665-201ENST00000516177 98 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-1332P-201ENST00000516666 104 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RNU6-667P-201ENST00000517186 102 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC115990.1-201ENST00000526957 301 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC109635.3-201ENST00000529536 185 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC118273.2-201ENST00000532092 465 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AC233702.2-202ENST00000562547 291 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 AP001836.1-201ENST00000604675 523 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 CTHRC1P1-201ENST00000605383 469 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 RMST_3.1-201ENST00000611651 109 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.84□□□□□ -2.11
EXOSC3Q9NQT5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
EXOSC3Q9NQT5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms