Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CYP3A52P-201ENST00000563326 91 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 MTCYBP33-201ENST00000575007 1130 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AP003465.2-201ENST00000602571 373 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AL136363.2-201ENST00000604173 851 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-37P-201ENST00000362692 107 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-11P-201ENST00000364234 107 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 MIR520A-201ENST00000384862 85 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-1176P-201ENST00000390955 107 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 ERHP2-201ENST00000402323 299 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-293P-201ENST00000411259 106 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AL008629.1-201ENST00000438615 184 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC119751.4-201ENST00000507498 357 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RN7SKP88-201ENST00000516847 250 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 SUMO2P18-201ENST00000518873 252 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC133485.1-201ENST00000567176 124 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC138907.6-201ENST00000568401 126 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC136932.1-201ENST00000574771 208 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC072039.2-201ENST00000608883 439 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 7SK.8-201ENST00000612110 250 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 7SK.11-201ENST00000615477 250 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 7SK.13-201ENST00000622040 250 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 Y_RNA.132-201ENST00000363421 102 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-224P-201ENST00000384055 107 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 MIR544A-201ENST00000384855 91 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 LARP1BP3-201ENST00000437229 869 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AL139824.2-201ENST00000458731 1095 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RPS27P22-201ENST00000478056 241 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC112206.3-201ENST00000514578 389 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 SNORA31.4-201ENST00000516049 129 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RNA5SP437-201ENST00000517249 129 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 SNORA77B-201ENST00000578179 125 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RN7SL793P-201ENST00000583259 296 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AL606834.3-201ENST00000602615 496 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AL021879.1-201ENST00000611756 288 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AL138955.1-201ENST00000622881 1040 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 AC120349.3-201ENST00000624377 529 ntBASIC0.56□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-439P-201ENST00000384188 106 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AL353777.1-201ENST00000425552 326 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 ART2BP-201ENST00000453501 499 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AL583843.1-201ENST00000456070 346 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC087854.1-201ENST00000519706 414 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC107934.1-201ENST00000522215 217 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AP001893.2-201ENST00000526949 202 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 BNIP3P6-201ENST00000549284 499 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC019288.1-201ENST00000557918 224 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 MIR544B-201ENST00000582372 78 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AL590229.1-201ENST00000603497 542 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AL022345.2-201ENST00000606307 135 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC022513.1-201ENST00000624512 117 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 AC006927.4-201ENST00000639187 543 ntBASIC0.55□□□□□ -2.32
KIAA1549Q9HCM3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 MIR302D-201ENST00000362275 68 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 SNORD56.1-201ENST00000362913 68 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 RNU2-39P-201ENST00000410604 198 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 RNA5SP111-201ENST00000411386 101 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 USP9YP11-201ENST00000427537 717 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC099677.2-201ENST00000436385 175 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 RNU1-131P-201ENST00000458943 161 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 HMGN2P9-201ENST00000476875 229 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC091163.3-201ENST00000518269 1144 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC090517.1-201ENST00000569307 266 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 BNIP3P16-201ENST00000589779 534 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC092106.3-201ENST00000611308 722 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC024940.5-201ENST00000622889 474 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC099786.3-201ENST00000565735 1410 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC073343.1-201ENST00000328239 651 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 Y_RNA.192-201ENST00000363977 102 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AL589872.1-201ENST00000426602 288 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC108078.1-201ENST00000508073 725 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC074344.1-201ENST00000512823 224 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 MTND2P7-201ENST00000521337 640 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 MTND4LP25-201ENST00000570218 163 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms