Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 RNU6-428P-201ENST00000362942 107 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 RNU6-743P-201ENST00000364151 106 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.553-201ENST00000384670 102 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 RNY3P9-201ENST00000384727 106 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 PRPS1P1-201ENST00000445305 876 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 GMFBP1-201ENST00000467831 427 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AC010424.1-201ENST00000506336 297 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 LRRC34P2-201ENST00000514850 553 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 RNU2-69P-201ENST00000516061 100 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 RNU6-667P-201ENST00000517186 102 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AL670379.2-201ENST00000604983 252 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AC002044.1-201ENST00000606707 158 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 AC022418.1-201ENST00000624118 445 ntBASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.98□□□□□ -2.09
RPAP3Q9H6T3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 RNU6-434P-201ENST00000384376 107 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 SNORA67.5-201ENST00000391036 107 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 RNU2-29P-201ENST00000410423 189 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 RNU2-32P-201ENST00000411193 191 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AL451074.3-201ENST00000437709 472 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AL356010.1-201ENST00000456364 102 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AC087884.1-201ENST00000469738 328 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 HMGB1P35-201ENST00000503360 598 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AC105417.1-201ENST00000514691 285 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.688-201ENST00000516565 95 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 RSL24D1P11-201ENST00000591045 491 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 AC010620.1-201ENST00000601088 1102 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPAP3Q9H6T3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 RNU6-105P-201ENST00000363909 104 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 RNU6-903P-201ENST00000391270 109 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 RNU6-293P-201ENST00000411259 106 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AP1B1P2-201ENST00000416196 106 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC079382.1-201ENST00000493346 557 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 RNU6-377P-201ENST00000515965 102 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AP001893.2-201ENST00000526949 202 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 CYCSP27-201ENST00000527643 293 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC023050.3-201ENST00000541142 333 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC073648.5-201ENST00000603502 305 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AL136363.2-201ENST00000604173 851 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC107304.1-201ENST00000604229 296 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC009509.4-201ENST00000619202 509 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 DUXAP9-208ENST00000622815 614 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 AC090582.1-201ENST00000636321 199 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 MTND4P23-201ENST00000447723 1363 ntBASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.96□□□□□ -2.1
RPAP3Q9H6T3 RNU6-234P-201ENST00000365229 104 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 RNU2-48P-201ENST00000410694 191 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 VN1R36P-201ENST00000414936 291 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 Z82205.1-201ENST00000428456 297 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AL360221.1-201ENST00000445989 335 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AL031274.1-201ENST00000450334 232 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 RPL30P1-201ENST00000488676 339 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AP000763.2-201ENST00000540641 163 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AGGF1P4-201ENST00000568249 801 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AC091135.1-201ENST00000585943 307 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AL391646.1-201ENST00000603860 190 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 RN7SKP299-201ENST00000606679 301 ntBASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.95□□□□□ -2.1
RPAP3Q9H6T3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 RNU6-552P-201ENST00000362869 119 ntBASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 RNU6-692P-201ENST00000384496 107 ntBASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 RNA5SP247-201ENST00000411181 105 ntBASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 AC243964.1-201ENST00000441814 261 ntBASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 SNRPFP3-201ENST00000457792 225 ntBASIC1.94□□□□□ -2.1
RPAP3Q9H6T3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms