Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AC091885.1-201ENST00000506658 268 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 SNORA14.1-201ENST00000516113 141 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 CYCSP27-201ENST00000527643 293 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AL162413.1-201ENST00000603198 110 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AC096772.1-201ENST00000609146 564 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNU6-451P-201ENST00000362921 107 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNU6-428P-201ENST00000362942 107 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 SNORD114-19-201ENST00000363072 75 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNY4P14-201ENST00000363656 96 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 SNORA3A-201ENST00000364113 130 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNA5SP125-201ENST00000364843 120 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNU6-1215P-201ENST00000384441 102 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNA5SP219-201ENST00000390940 113 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RPS29P13-201ENST00000402041 169 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AL117339.3-201ENST00000418733 162 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AL365400.1-201ENST00000431854 640 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AC243964.1-201ENST00000441814 261 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AC006026.2-201ENST00000457376 180 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AC079140.5-201ENST00000507882 310 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNU6-1069P-201ENST00000516612 133 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNU6-250P-201ENST00000516958 103 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 AL713866.2-201ENST00000603579 219 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 RNU6-89P-201ENST00000606519 100 ntBASIC2.06□□□□□ -2.08
RNF41Q9H4P4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 FER-210ENST00000628534 558 ntTSL 5 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.06□□□□□ -2.08
RNF41Q9H4P4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNY3P3-201ENST00000363816 102 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNU6-336P-201ENST00000364891 107 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNU4-66P-201ENST00000365199 138 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 MIR186-201ENST00000384988 86 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNU2-23P-201ENST00000410545 195 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AL030996.1-201ENST00000411430 235 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 MTCO1P21-201ENST00000416634 589 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AIMP1P2-201ENST00000425294 312 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 MTCO1P20-201ENST00000425366 358 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 SEPT14P3-201ENST00000439401 183 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AL732372.2-207ENST00000445840 183 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 SEPT14P2-201ENST00000453405 183 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 snoU13.14-201ENST00000459372 104 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNU6-1208P-201ENST00000459588 107 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 SEPT14P4-201ENST00000513445 186 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNU6-377P-201ENST00000515965 102 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 RNU6-189P-201ENST00000516120 101 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 SNORD60.2-201ENST00000516883 86 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 FO082796.1-201ENST00000523795 183 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 MIR4255-201ENST00000579351 72 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AC092807.2-201ENST00000609367 243 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AC090517.2-201ENST00000614966 680 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
RNF41Q9H4P4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF41Q9H4P4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RNF41Q9H4P4 RNU1-57P-201ENST00000384491 166 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 MIR95-201ENST00000385072 81 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RNF41Q9H4P4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.04□□□□□ -2.08
RNF41Q9H4P4 RPL7P12-201ENST00000446719 750 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 Y_RNA.654-201ENST00000497848 106 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 AC109479.2-201ENST00000517842 174 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 ZNF519P2-201ENST00000557032 169 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 AC010525.2-201ENST00000590920 195 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 RNU6-85P-201ENST00000605989 107 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 AC104458.1-201ENST00000608243 463 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 uc_338.15-201ENST00000615470 191 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 MIR7843-201ENST00000622274 79 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 AC097372.5-201ENST00000623665 376 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RNF41Q9H4P4 AC121333.1-201ENST00000567488 2709 ntBASIC2.04□□□□□ -2.08
RNF41Q9H4P4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.03□□□□□ -2.08
RNF41Q9H4P4 OR4G1P-203ENST00000641984 1631 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 Y_RNA.231-201ENST00000364358 102 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 Y_RNA.256-201ENST00000364594 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms