Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC136443.5-201ENST00000603741 370 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 AL121917.1-203ENST00000605534 577 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.85□□□□□ -1.95
CDT1Q9H211 AC107871.2-201ENST00000612894 502 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 AC110079.1-202ENST00000635213 138 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDT1Q9H211 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CDT1Q9H211 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CDT1Q9H211 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDT1Q9H211 Y_RNA.80-201ENST00000362996 102 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 Y_RNA.459-201ENST00000384251 102 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 Y_RNA.485-201ENST00000384395 102 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 FTH1P15-201ENST00000406984 280 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 Y_RNA.605-201ENST00000410577 105 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.84□□□□□ -1.95
CDT1Q9H211 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.84□□□□□ -1.95
CDT1Q9H211 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.84□□□□□ -1.95
CDT1Q9H211 AL645568.3-201ENST00000433683 316 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AL035666.1-201ENST00000446195 348 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.84□□□□□ -1.95
CDT1Q9H211 RNU6-470P-201ENST00000515954 104 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 RNU1-54P-201ENST00000517181 120 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AP004607.1-201ENST00000524456 203 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AC103996.1-201ENST00000555468 102 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.84□□□□□ -1.95
CDT1Q9H211 AC008739.2-201ENST00000597006 317 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 CYP2C61P-201ENST00000604072 290 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.84□□□□□ -1.95
CDT1Q9H211 U4.7-201ENST00000638126 106 ntBASIC2.84□□□□□ -1.95
CDT1Q9H211 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.84□□□□□ -1.96
CDT1Q9H211 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.96
CDT1Q9H211 AC138915.1-201ENST00000565427 1685 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 Y_RNA.2-201ENST00000362330 96 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 RNU6-428P-201ENST00000362942 107 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 Y_RNA.133-201ENST00000363428 110 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 Y_RNA.145-201ENST00000363527 102 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 RNU6-593P-201ENST00000364716 112 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 DYNLT3P1-201ENST00000378574 347 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 RNY1P14-201ENST00000384426 108 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 MIR517A-201ENST00000385001 87 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 MIR568-201ENST00000385036 95 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 RNA5SP354-201ENST00000391247 136 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 SNORA75.6-201ENST00000391318 127 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 AL030996.1-201ENST00000411430 235 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.83□□□□□ -1.96
CDT1Q9H211 MCFD2P1-201ENST00000417812 300 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 AL117339.3-201ENST00000418733 162 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 UBE2V1P4-201ENST00000425374 344 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDT1Q9H211 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.83□□□□□ -1.96
CDT1Q9H211 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.83□□□□□ -1.96
CDT1Q9H211 AL161651.1-201ENST00000440882 223 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 AC011816.1-201ENST00000441346 546 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDT1Q9H211 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDT1Q9H211 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.83□□□□□ -1.96
CDT1Q9H211 SRIP1-201ENST00000489235 288 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 RPS27P26-201ENST00000494583 239 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.83□□□□□ -1.96
CDT1Q9H211 RNU6-377P-201ENST00000515965 102 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.83□□□□□ -1.96
CDT1Q9H211 TRAV32-201ENST00000553993 340 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.83□□□□□ -1.96
CDT1Q9H211 MIR6817-201ENST00000615588 66 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 PISRT1.1-201ENST00000616930 107 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 AC091925.1-201ENST00000623204 462 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDT1Q9H211 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.83□□□□□ -1.96
CDT1Q9H211 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDT1Q9H211 AC008669.1-201ENST00000565823 2178 ntBASIC2.83□□□□□ -1.96
CDT1Q9H211 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDT1Q9H211 RNU6-858P-201ENST00000362436 107 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 RNU1-105P-201ENST00000363470 161 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 Y_RNA.422-201ENST00000384054 114 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 RNU6-1105P-201ENST00000384774 107 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 MIR767-201ENST00000390228 109 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 Y_RNA.645-201ENST00000391229 102 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 AL513477.1-202ENST00000417061 214 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 MRPS18CP6-201ENST00000423587 223 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 MTND3P2-201ENST00000438452 342 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 AC009969.1-201ENST00000438726 172 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.82□□□□□ -1.96
CDT1Q9H211 GSTA11P-201ENST00000452866 669 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 MRPL42P6-201ENST00000486397 371 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.82□□□□□ -1.96
CDT1Q9H211 AC018437.1-201ENST00000492214 406 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 AC022493.2-201ENST00000506122 481 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 Y_RNA.661-201ENST00000516003 99 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 AC109479.2-201ENST00000517842 174 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.82□□□□□ -1.96
CDT1Q9H211 AC025281.1-201ENST00000567026 265 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 MIR4680-201ENST00000580906 66 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 MIR3945-201ENST00000581853 98 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms