Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC073901.1-201ENST00000462471 408 ntBASIC3.83□□□□□ -1.8
LRRC3Q9BY71 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC3Q9BY71 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC3Q9BY71 SNORA31.1-201ENST00000515993 133 ntBASIC3.83□□□□□ -1.8
LRRC3Q9BY71 SNORA31.5-201ENST00000516190 133 ntBASIC3.83□□□□□ -1.8
LRRC3Q9BY71 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.83□□□□□ -1.8
LRRC3Q9BY71 AL034555.1-201ENST00000604816 211 ntBASIC3.83□□□□□ -1.8
LRRC3Q9BY71 AP000553.6-201ENST00000641242 118 ntBASIC3.83□□□□□ -1.8
LRRC3Q9BY71 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC3Q9BY71 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AL136164.4-201ENST00000625013 2135 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 RNU6-200P-201ENST00000364743 107 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 SNORA72.2-201ENST00000365028 127 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 RNU6-514P-201ENST00000384208 107 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 U3.26-201ENST00000391236 204 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 RNU6-1077P-201ENST00000410506 102 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AL390729.2-201ENST00000416137 156 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 CYCSP48-201ENST00000417124 323 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AC010095.1-201ENST00000443543 144 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 UQCRBP2-201ENST00000447827 297 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 RN7SL93P-201ENST00000463035 293 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AC008155.2-201ENST00000464337 397 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 SERF1AP1-201ENST00000514575 187 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 Y_RNA.683-201ENST00000516508 93 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 SNORA70.18-201ENST00000516696 98 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
LRRC3Q9BY71 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC3Q9BY71 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU6-1010P-201ENST00000362757 107 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU6-626P-201ENST00000363354 107 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU1-105P-201ENST00000363470 161 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 Y_RNA.179-201ENST00000363844 90 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU6-20P-201ENST00000384106 107 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU6-1145P-201ENST00000384246 107 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU6-138P-201ENST00000515952 107 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU5F-2P-201ENST00000516066 82 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 RNU4-71P-201ENST00000516258 113 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AK6P2-201ENST00000549020 471 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 MIR3200-201ENST00000580767 85 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AC012493.2-201ENST00000595083 291 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AC005176.2-201ENST00000596933 147 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 U2.14-201ENST00000615943 113 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AC073346.2-201ENST00000624724 2058 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 AC010680.1-201ENST00000590024 3590 ntBASIC3.81□□□□□ -1.8
LRRC3Q9BY71 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC3Q9BY71 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 RNU1-18P-201ENST00000363062 164 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 RNA5SP267-201ENST00000364893 126 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 RNU6-209P-201ENST00000384118 107 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 CYCSP35-201ENST00000451978 304 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 HSPE1P25-201ENST00000455484 251 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 AP001324.2-201ENST00000461163 319 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 SNRPGP20-201ENST00000604477 205 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 AC006001.4-201ENST00000622243 395 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
LRRC3Q9BY71 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.8□□□□□ -1.8
LRRC3Q9BY71 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms