Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 AL109809.4-201ENST00000603520 2185 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 MTND5P30-201ENST00000452896 1731 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RNA5SP68-201ENST00000363885 119 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RNU6-1141P-201ENST00000364520 107 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 SNORD21-201ENST00000383953 95 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RNU6-890P-201ENST00000384121 107 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 EIF4EP2-201ENST00000422816 654 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RN7SL429P-201ENST00000479090 223 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RN7SL489P-201ENST00000486185 223 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RN7SL327P-201ENST00000488659 223 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 SEM1P1-201ENST00000506694 209 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 Y_RNA.701-201ENST00000516812 110 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 7SK.7-201ENST00000603504 247 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 RN7SL853P-201ENST00000617250 223 ntBASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.88□□□□□ -1.95
PAAF1Q9BRP4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 MIR26A1-201ENST00000362205 77 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 RNU6-968P-201ENST00000384076 107 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 SNORA75.6-201ENST00000391318 127 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AF228730.4-201ENST00000421457 183 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 MTCO2P12-201ENST00000427426 682 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AC244670.1-201ENST00000436879 112 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 GPM6BP3-201ENST00000442797 145 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 MIR2053-201ENST00000459295 91 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 RPS27P29-201ENST00000463110 252 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AC016632.1-201ENST00000503994 196 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AC005741.1-201ENST00000511094 432 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 SNORA31.6-201ENST00000516241 130 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 CBX3P8-201ENST00000532412 525 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 AC027176.1-201ENST00000560204 514 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 CYP2C61P-201ENST00000604072 290 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 MIR6817-201ENST00000615588 66 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 MIR7515-201ENST00000637837 67 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 MAPK10-362ENST00000641864 4484 ntBASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.87□□□□□ -1.95
PAAF1Q9BRP4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC233981.2-201ENST00000611524 1614 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 Z75746.1-201ENST00000440243 2080 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNU6-784P-201ENST00000384330 106 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNU6-1011P-201ENST00000384668 107 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNU2-23P-201ENST00000410545 195 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC009963.1-201ENST00000417265 157 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC097463.2-201ENST00000421074 142 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AL353997.1-201ENST00000432936 108 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNU7-152P-201ENST00000458982 64 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC006483.1-201ENST00000487308 313 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC068781.1-201ENST00000488231 618 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC022493.2-201ENST00000506122 481 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNA5SP112-201ENST00000515937 99 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 RNA5SP148-201ENST00000516527 94 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC115990.1-201ENST00000526957 301 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC093249.1-201ENST00000567049 203 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC044792.1-201ENST00000593294 196 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 AC073410.2-201ENST00000603240 332 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PAAF1Q9BRP4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 ZNF299P-201ENST00000406845 1804 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 MIR369-201ENST00000362155 70 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 RNU4-76P-201ENST00000364509 141 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 SNORD32A-201ENST00000364805 84 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AL353705.4-201ENST00000449661 238 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AC091874.1-201ENST00000511402 339 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AC096725.1-201ENST00000514266 313 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 RNU6-1153P-201ENST00000516760 105 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AC009318.2-201ENST00000610917 651 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 AL359198.2-201ENST00000611836 194 ntBASIC2.85□□□□□ -1.95
PAAF1Q9BRP4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms