Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU6-968P-201ENST00000384076 107 ntBASIC3.14□□□□□ -1.91
SMOQ99835 RNU6-463P-201ENST00000384340 107 ntBASIC3.14□□□□□ -1.91
SMOQ99835 RNU6-101P-201ENST00000410323 104 ntBASIC3.14□□□□□ -1.91
SMOQ99835 RPL23AP95-201ENST00000426806 265 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.14□□□□□ -1.91
SMOQ99835 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.14□□□□□ -1.91
SMOQ99835 AL031183.1-201ENST00000457667 207 ntBASIC3.14□□□□□ -1.91
SMOQ99835 RN7SKP210-201ENST00000459176 261 ntBASIC3.14□□□□□ -1.91
SMOQ99835 SNRPGP7-201ENST00000469016 106 ntBASIC3.14□□□□□ -1.91
SMOQ99835 RPL30P1-201ENST00000488676 339 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.14□□□□□ -1.91
SMOQ99835 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
SMOQ99835 SNORA31.1-201ENST00000515993 133 ntBASIC3.14□□□□□ -1.91
SMOQ99835 SNORA31.5-201ENST00000516190 133 ntBASIC3.14□□□□□ -1.91
SMOQ99835 SNORA40.14-201ENST00000516543 86 ntBASIC3.14□□□□□ -1.91
SMOQ99835 Y_RNA.721-201ENST00000517207 102 ntBASIC3.14□□□□□ -1.91
SMOQ99835 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AC144568.1-201ENST00000520139 137 ntBASIC3.14□□□□□ -1.91
SMOQ99835 COX6CP5-201ENST00000527162 228 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
SMOQ99835 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.14□□□□□ -1.91
SMOQ99835 AC091152.3-201ENST00000604227 325 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AC124312.5-201ENST00000604451 268 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AC093732.2-201ENST00000607950 274 ntBASIC3.14□□□□□ -1.91
SMOQ99835 7SK.10-201ENST00000621414 298 ntBASIC3.14□□□□□ -1.91
SMOQ99835 MIR3529-201ENST00000637713 78 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AC000403.1-201ENST00000613696 3585 ntBASIC3.14□□□□□ -1.91
SMOQ99835 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SMOQ99835 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SMOQ99835 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
SMOQ99835 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
SMOQ99835 AC004944.1-201ENST00000517807 3059 ntBASIC3.13□□□□□ -1.91
SMOQ99835 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SMOQ99835 AC103988.1-201ENST00000566382 2177 ntBASIC3.13□□□□□ -1.91
SMOQ99835 SNORD14.1-201ENST00000365609 90 ntBASIC3.13□□□□□ -1.91
SMOQ99835 RNU6-622P-201ENST00000384272 103 ntBASIC3.13□□□□□ -1.91
SMOQ99835 RNU6-1140P-201ENST00000410517 106 ntBASIC3.13□□□□□ -1.91
SMOQ99835 DPH3P2-201ENST00000422618 250 ntBASIC3.13□□□□□ -1.91
SMOQ99835 MTCYBP9-201ENST00000431021 303 ntBASIC3.13□□□□□ -1.91
SMOQ99835 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.13□□□□□ -1.91
SMOQ99835 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.13□□□□□ -1.91
SMOQ99835 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
SMOQ99835 RPL23AP75-201ENST00000491601 451 ntBASIC3.13□□□□□ -1.91
SMOQ99835 MTCO2P24-201ENST00000515611 426 ntBASIC3.13□□□□□ -1.91
SMOQ99835 RNU5F-8P-201ENST00000515941 111 ntBASIC3.13□□□□□ -1.91
SMOQ99835 AC022616.4-201ENST00000522985 181 ntBASIC3.13□□□□□ -1.91
SMOQ99835 AC040926.1-201ENST00000530195 238 ntBASIC3.13□□□□□ -1.91
SMOQ99835 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.13□□□□□ -1.91
SMOQ99835 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.13□□□□□ -1.91
SMOQ99835 AC104581.2-201ENST00000572227 430 ntBASIC3.13□□□□□ -1.91
SMOQ99835 VN1R91P-201ENST00000594377 169 ntBASIC3.13□□□□□ -1.91
SMOQ99835 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.13□□□□□ -1.91
SMOQ99835 U2.1-201ENST00000618978 145 ntBASIC3.13□□□□□ -1.91
SMOQ99835 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.13□□□□□ -1.91
SMOQ99835 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMOQ99835 AL355596.1-201ENST00000565399 3996 ntBASIC3.13□□□□□ -1.91
SMOQ99835 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.13□□□□□ -1.91
SMOQ99835 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
SMOQ99835 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMOQ99835 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.12□□□□□ -1.91
SMOQ99835 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.12□□□□□ -1.91
SMOQ99835 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
SMOQ99835 RNU6-1286P-201ENST00000383871 107 ntBASIC3.12□□□□□ -1.91
SMOQ99835 RNU6-196P-201ENST00000384315 107 ntBASIC3.12□□□□□ -1.91
SMOQ99835 SNORA46-201ENST00000384762 135 ntBASIC3.12□□□□□ -1.91
SMOQ99835 SNORA69.1-201ENST00000390904 137 ntBASIC3.12□□□□□ -1.91
SMOQ99835 SAR1AP2-201ENST00000392696 594 ntBASIC3.12□□□□□ -1.91
SMOQ99835 MIR190B-201ENST00000401119 79 ntBASIC3.12□□□□□ -1.91
SMOQ99835 Y_RNA.592-201ENST00000410274 109 ntBASIC3.12□□□□□ -1.91
SMOQ99835 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
SMOQ99835 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
SMOQ99835 TOMM22P6-201ENST00000465035 409 ntBASIC3.12□□□□□ -1.91
SMOQ99835 AC010655.3-201ENST00000478818 450 ntBASIC3.12□□□□□ -1.91
SMOQ99835 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
SMOQ99835 CKS1BP7-201ENST00000522230 235 ntBASIC3.12□□□□□ -1.91
SMOQ99835 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.12□□□□□ -1.91
SMOQ99835 AC090897.2-201ENST00000581715 130 ntBASIC3.12□□□□□ -1.91
SMOQ99835 MIR4503-201ENST00000582187 83 ntBASIC3.12□□□□□ -1.91
SMOQ99835 AC016727.2-201ENST00000603988 621 ntBASIC3.12□□□□□ -1.91
SMOQ99835 AL138825.1-201ENST00000618587 192 ntBASIC3.12□□□□□ -1.91
SMOQ99835 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMOQ99835 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMOQ99835 AL365361.1-201ENST00000566942 3481 ntBASIC3.11□□□□□ -1.91
SMOQ99835 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.11□□□□□ -1.91
SMOQ99835 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMOQ99835 Y_RNA.47-201ENST00000362697 108 ntBASIC3.11□□□□□ -1.91
SMOQ99835 RNU4-9P-201ENST00000364951 139 ntBASIC3.11□□□□□ -1.91
SMOQ99835 SNORA29-201ENST00000384183 140 ntBASIC3.11□□□□□ -1.91
SMOQ99835 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SMOQ99835 AL133475.1-201ENST00000404414 305 ntBASIC3.11□□□□□ -1.91
SMOQ99835 MTCYBP2-201ENST00000407745 171 ntBASIC3.11□□□□□ -1.91
SMOQ99835 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
SMOQ99835 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
SMOQ99835 EIF1AXP1-201ENST00000419267 435 ntBASIC3.11□□□□□ -1.91
SMOQ99835 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
SMOQ99835 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMOQ99835 PTGES3P4-201ENST00000426243 356 ntBASIC3.11□□□□□ -1.91
SMOQ99835 RPL21P2-201ENST00000440049 481 ntBASIC3.11□□□□□ -1.91
SMOQ99835 snoU13.30-201ENST00000458951 104 ntBASIC3.11□□□□□ -1.91
SMOQ99835 RPL30P12-201ENST00000474666 353 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms