Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MIR5692A1-201ENST00000580523 69 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AC110760.3-201ENST00000598794 467 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AC083806.3-201ENST00000614016 455 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AC009033.1-201ENST00000624279 431 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AL157786.1-207ENST00000627771 695 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 U4.7-201ENST00000638126 106 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.81□□□□□ -2.28
CCL13Q99616 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.81□□□□□ -2.28
CCL13Q99616 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CCL13Q99616 RNU6-862P-201ENST00000362804 105 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 SNORA63D-201ENST00000364359 132 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 RNU6-1019P-201ENST00000364424 107 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 SNORA32.2-201ENST00000384049 122 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 RNU6-39P-201ENST00000384344 107 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 SNORA24.1-201ENST00000384401 135 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 SNORA40.4-201ENST00000390971 128 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 RNU6-1242P-201ENST00000391052 103 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 RNU6-1245P-201ENST00000411130 106 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 MRPL35P3-201ENST00000421557 364 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AC137499.1-201ENST00000427602 88 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.8□□□□□ -2.28
CCL13Q99616 AC132479.1-201ENST00000449160 144 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 ATP5J2P3-201ENST00000451550 258 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 HMGN2P9-201ENST00000476875 229 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AL163195.1-201ENST00000496941 348 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.8□□□□□ -2.28
CCL13Q99616 RBBP4P6-201ENST00000508098 202 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 MTCO3P28-201ENST00000513351 515 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.8□□□□□ -2.28
CCL13Q99616 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 ZNF519P3-201ENST00000557158 1032 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AC109446.1-201ENST00000566172 220 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 MIR3136-201ENST00000583498 78 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 RNU6-87P-201ENST00000607561 108 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.8□□□□□ -2.28
CCL13Q99616 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.8□□□□□ -2.28
CCL13Q99616 AC099654.5-201ENST00000636479 350 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AL159152.1-201ENST00000635019 2587 ntBASIC0.8□□□□□ -2.28
CCL13Q99616 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.79□□□□□ -2.28
CCL13Q99616 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CCL13Q99616 RNU6-105P-201ENST00000363909 104 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 RNU6-1080P-201ENST00000383982 107 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 SNORA12.2-201ENST00000391040 156 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 MTCO2P21-201ENST00000419780 677 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 CALM2P2-201ENST00000428512 440 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 MTND1P20-201ENST00000430341 950 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.79□□□□□ -2.28
CCL13Q99616 RPL37P21-201ENST00000435890 276 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.79□□□□□ -2.28
CCL13Q99616 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.79□□□□□ -2.28
CCL13Q99616 PGBD4P5-201ENST00000445958 426 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL13Q99616 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL13Q99616 MTND3P25-201ENST00000509243 135 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL13Q99616 AP001893.2-201ENST00000526949 202 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.79□□□□□ -2.28
CCL13Q99616 AL512310.8-201ENST00000550183 120 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 AC008521.1-201ENST00000587471 187 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 AC008752.3-201ENST00000588113 712 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 MZT1P2-201ENST00000604387 248 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 MIR3976-201ENST00000606807 139 ntBASIC0.79□□□□□ -2.28
CCL13Q99616 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CCL13Q99616 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CCL13Q99616 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 RNU6-157P-201ENST00000383957 107 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 RNU6-636P-201ENST00000384598 107 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 RNU6-331P-201ENST00000384724 107 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 MIR194-1-201ENST00000384892 85 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 RNU6-1176P-201ENST00000390955 107 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CCL13Q99616 MTCYBP2-201ENST00000407745 171 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 RNU2-39P-201ENST00000410604 198 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL13Q99616 SNX2P2-201ENST00000424553 323 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AC243964.1-201ENST00000441814 261 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AL031313.1-201ENST00000448435 256 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL13Q99616 RPL31P3-201ENST00000458430 332 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AC114982.1-201ENST00000469402 321 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
CCL13Q99616 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL13Q99616 AC117522.1-201ENST00000509821 380 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.78□□□□□ -2.28
CCL13Q99616 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.78□□□□□ -2.28
CCL13Q99616 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL13Q99616 RN7SKP265-201ENST00000516448 223 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL13Q99616 MTND4LP18-201ENST00000526864 291 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.78□□□□□ -2.28
CCL13Q99616 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL13Q99616 AC012507.3-201ENST00000603556 477 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AC103810.9-201ENST00000606688 112 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
CCL13Q99616 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CCL13Q99616 RNU1-96P-201ENST00000364163 162 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms